Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_
202017-07-27] 2,859 sequences; 56,328,106 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 113 1e-19
>seq2317
Length=1589273
Score = 113 bits (124), Expect = 1e-19
Identities = 615/963 (64%), Gaps = 34/963 (4%)
Strand=Plus/Minus
Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842
||||| || |||| ||| | | ||||| | ||| | | ||||| ||||| ||
Sbjct 799511 TGGACTCTGCCATTGTCTATGACCGCGATTTCCAATACCAATACTTTGGCTTCAAGACTT 799452
Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902
||||| ||| || |||||||| ||||| || ||||| || || || ||||||||||
Sbjct 799451 TGGAGCGATCATACCTCCTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCAGCACATGA 799392
Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962
| ||||| ||| |||| || ||| ||||| || ||| | || | ||||| ||||
Sbjct 799391 TCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGTCTTGGAGACATACA 799332
Query 248963 CCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA 249019
| ||| || || || | ||||||||| | || ||||||||||||||||| |
Sbjct 799331 ACCTGATGTCCAGCAAATTCT---TCACACATGCCTCTCCCACGCTCTTCAACGCCGGCA 799275
Query 249020 -CCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGAC 249078
|| ||| | || || || ||||| | ||| ||| | |||||| | | ||
Sbjct 799274 CCCCTCAGC-CCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAG 799216
Query 249079 GGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAATC 249135
|| || || || || || | |||| || | ||| || || | || || || ||
Sbjct 799215 GGAATCTACGATACTCTCA---AGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATT 799159
Query 249136 GGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTC 249195
||||| ||| | ||||| || | || || |||||| ||||| || || |
Sbjct 799158 GGTCTGAACGTGCACCGTATCCGTGCTACTGGCTCCTACATCGCCGGTACCAA-CGGTAC 799100
Query 249196 AGTG-ATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCA 249254
| | | ||| | || || | ||||| ||| | ||| || | | || ||||
Sbjct 799099 ATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTATGTCGACCA 799040
Query 249255 GGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATAT 249311
|| || | ||| || | || ||||| || | || |||||| | ||| |
Sbjct 799039 GGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGATGT 798980
Query 249312 ATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCT 249371
|| |||||||| || | |||||| |||| || ||| | | || ||||||||
Sbjct 798979 CTTCGAGTTCCTTGATCTCCGCAAGAACCACGGTAAAGAGGAGGTCCGTGCCCGTGACCT 798920
Query 249372 CTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTG 249431
||| || ||| ||| || | || | |||||| || || | ||||||| ||
Sbjct 798919 TTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGCGACTG 798860
Query 249432 GACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCCGACTTCG 249490
|||||| | | || ||| ||| | |||| ||| || | |||| | || ||||
Sbjct 798859 GACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGA-CTGCTACGGAGAGGAGTTCG 798801
Query 249491 ACCAAGC-CTATAAGAAA--TACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTC 249544
| || || || |||| ||||| | |||| | ||||||| ||||||||||
Sbjct 798800 ---AGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACTATCAAGGCTC 798744
Query 249545 GGACCCTTT-TTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TT 249602
|| |||| | || | | ||| |||||| ||||| || || | | || |
Sbjct 798743 AGAAACTTTGGTACG-CCATTCTTGAGGCCCAGACTGAGACCGGAAACCCAT-TCATGCT 798686
Query 249603 GTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTC 249662
| ||| || || |||||| |||||| |||||| | | || ||||||||||| ||
Sbjct 798685 CTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCCGAAGCTC 798626
Query 249663 AAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCT 249722
|| || || | || | ||| | |||| || || ||| | || |||||||||||
Sbjct 798625 CAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGTCTGCAACCT 798566
Query 249723 GGC 249725
||
Sbjct 798565 TGC 798563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073727066930112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |