Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_
202017-07-27] 2,859 sequences; 56,328,106 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2339 125 6e-24
>seq2339
Length=1374216
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| || ||||| || | ||| || ||||||| ||| ||| |||| |||
Sbjct 541973 GTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTG 542032
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || | ||||| | | |||||||| || |||||||| || ||||| | ||| ||
Sbjct 542033 CTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTT 542092
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||| ||| | ||| ||||||| | ||||| |||| |||||||| ||||||||
Sbjct 542093 GCTCTTCACGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGT 542152
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
||||| |||||||||||||||||
Sbjct 542153 GAGAGTCTTCACAAAGATCTGCAT 542176
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | |||||| ||||| || | ||| ||||| | |||| | ||||| |||||
Sbjct 542711 GTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 542770
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| ||| | || || || | |||||| || || || || || || ||||| | ||| ||
Sbjct 542771 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTT 542830
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
| |||||| | ||| |||||| | || || || | |||||||| || || ||
Sbjct 542831 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 542890
Query 94984 AAGAGTTTTCACAAAGATCTGCATG 95008
| || || || ||||||||||||
Sbjct 542891 CAAGGTCTTGACGAAGATCTGCATG 542915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448275179193240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |