Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_
202017-07-27] 2,859 sequences; 56,328,106 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 251 8e-62
seq524 104 3e-17
seq1712 86.0 7e-12
>seq2317
Length=1589273
Score = 251 bits (278), Expect = 8e-62
Identities = 1085/1692 (64%), Gaps = 59/1692 (3%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466
||||| || ||||| || || ||||| ||| |||||| || | || | ||||| |
Sbjct 797681 CGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 797739
Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526
|| ||| | || || || ||| | ||||| ||||| |||||||| |||||
Sbjct 797740 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 797799
Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582
||| |||||||| ||||| | | || ||| ||| | | ||||| || |
Sbjct 797800 GGCACCTCGATCAGCAGCCATCTGAACGA----CTTGGCGCTGAGAGATCTCCCAAACGG 797855
Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639
|||| |||| | ||||| ||| | || |||| ||||| ||||| || |||
Sbjct 797856 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 797915
Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699
|||| | | || | | |||||| | | ||||| ||||| | | | || | ||
Sbjct 797916 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 797969
Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756
| || || | ||||| || || |||||||| || ||||| ||||||
Sbjct 797970 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGTCGTTGGTAGA 798029
Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816
|||| | |||||||| ||||| ||||| |||||||| || || || | || || |
Sbjct 798030 TGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 798089
Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876
| ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || |
Sbjct 798090 TAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 798149
Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936
| ||||| || | | || | || | | |||||| || || |
Sbjct 798150 GAGTCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 798203
Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996
| | |||||||| || || ||||| ||||| | ||| | ||||| ||| ||||
Sbjct 798204 GGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 798263
Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055
|| | | | || | | || || || || || || ||||| || || || || ||
Sbjct 798264 GCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGC---TTGTTG 798319
Query 110056 AGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAG 110111
|| |||| ||| | |||||||| | | || || || || |||| || ||
Sbjct 798320 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAG 798378
Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171
||||||||||| ||||||||||| || || ||||||| | ||||| | ||
Sbjct 798379 GCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGAC 798438
Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231
||||| ||| ||||||| | || || || | ||| || ||| |
Sbjct 798439 AGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTT 798498
Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAA 110290
|| | || | | | ||| | | | || | || |||| | ||| ||||| |
Sbjct 798499 GTGCAACTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAAGAGGGCAGAGCCA 798557
Query 110291 TAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTAC 110350
||| ||||| ||||| |||| |||||| | | ||| || | |||||| || |
Sbjct 798558 GAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGTGC 798617
Query 110351 ACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCAT 110410
||| |||||| || ||| ||| | |||||| || || ||| |||||| ||||
Sbjct 798618 ACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCAT 798677
Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470
|||| ||||||||| ||||| | || || || ||||| | || |||||||| | ||| |
Sbjct 798678 CCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA 798737
Query 110471 CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAA 110528
| || || ||| |||| | | || |||| ||||||||| |||||
Sbjct 798738 GTTTCTGAGCCTTGATAGTCTTGCG--ACCCTTGCCCTCCTTCTCGTACTTTTCGTACAG 798795
Query 110529 GTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAG 110588
|||| || |||| |||||| || | || || || || ||| || | ||
Sbjct 798796 AGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAG 798855
Query 110589 GGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGA 110648
| ||| | || || ||||| | ||||||||| || ||||| ||||| | ||
Sbjct 798856 CGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAG 798915
Query 110649 GAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708
||||||||||||| ||| |||| || | ||| ||||| ||| || || | || ||
Sbjct 798916 GAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTGCGGAGATCAAGGAACTC 798975
Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGACG 110762
| || ||| |||||||| || ||||| ||| | ||| || || ||| | |
Sbjct 798976 GAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG 799033
Query 110763 ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCC 110822
|| |||||| |||||||| || ||| |||||||| | |||||||||| || ||
Sbjct 799034 -CCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACC 799092
Query 110823 ATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATG 110882
| ||| ||| || ||||| || ||| | | ||||| || ||| | |
Sbjct 799093 GTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTT 799152
Query 110883 CATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAA 110941
|| |||||||||||| ||| ||| || ||||| ||| |||| ||| | || |
Sbjct 799153 CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGA 799211
Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001
| || ||||| || |||| | ||| | |||||||| |||| || || |||
Sbjct 799212 TTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAG 799271
Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTT 111059
| || || || |||||||| || || | ||||| ||| ||| ||| |||||||
Sbjct 799272 GGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGA--AGAATTTGCTGGACATCAG 799329
Query 111060 GTTGTATGTGTC 111071
||||||||| ||
Sbjct 799330 GTTGTATGTCTC 799341
>seq524
Length=751848
Score = 104 bits (114), Expect = 3e-17
Identities = 250/373 (67%), Gaps = 18/373 (5%)
Strand=Plus/Plus
Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651
||||||||||||||| ||||||| |||||| | || ||| ||||||||||||
Sbjct 268683 GAAACCGTCCATTTCAGTGAGAATCTGGTTCAGAGTTGCTTCCCGCTCATCGTTGCCAC- 268741
Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACA-------GCGTCAATCTCATCGATGAATA 11704
|| | | || |||| | | | | | || |||||||||||||| ||||| |
Sbjct 268742 CAAATCCCCGGCCGCTCTCCTGTCGCGCACGTCCAATTGCGTCAATCTCATCAATGAAGA 268801
Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764
||| || || ||| |||| | | |||| | || | ||||| | || |
Sbjct 268802 TGATGCAAGGGGCGTTCTTACGTCCTTCGGCGAACAAATCTCTCACACGTGAAGGACCGA 268861
Query 11765 CACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGA 11822
|||| || ||||| |||||||| | | | || | ||||||| ||| || || |||
Sbjct 268862 CACCGACAAACATTTCAACGAACTCAGAACCGCTCA-CACTGAA-GAATGGTACTCCAGA 268919
Query 11823 CTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882
||| || || |||| || || | |||||||| |||||||| | |||||| | |
Sbjct 268920 CTCGCCGGCCGTGGCCTTGGCAAGCAATGTCTTACCGGTACCAGGAGGACCAGCTAAGAT 268979
Query 11883 GGCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939
|| || || |||||||||||||| || | || | ||| |||| ||| |||||
Sbjct 268980 AGCACCTCGAGGGATCTTGGCACCTAGCTTTTCGAATT---TCTCGGGCTGCTTCAGGAA 269036
Query 11940 GTCCACAATCTCC 11952
| ||||| ||||
Sbjct 269037 GCTCACAAACTCC 269049
>seq1712
Length=1031001
Score = 86.0 bits (94), Expect = 7e-12
Identities = 206/303 (68%), Gaps = 9/303 (3%)
Strand=Plus/Minus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || ||||| || ||||| |||||||||||||| || |||| || ||
Sbjct 111557 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 111498
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||||| || | ||||| ||||| ||||| | || ||| ||||||||
Sbjct 111497 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGAT 111438
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670
||||| ||| |||||||| | ||||||| || ||||| ||| ||| || ||
Sbjct 111437 ACCCTCAACAGCAGCGAAAGCAACGAGACGCTGGGC-AAAGGAGGAGTCCTTATCCTGGA 111379
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGC-TTC 119728
||| || ||||||| |||||| | || |||||||||| || | ||||| ||
Sbjct 111378 TCCATCGGATGGCCCAGTCGGCCTT-CTTTCGGATGCAGGGGATGGTCTCAATGGCGTTA 111320
Query 119729 GAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788
| | || | ||| | || ||||| || || | |||||||| ||||||||
Sbjct 111319 AAGAGGTAGGTTC-GCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGT 111261
Query 119789 CTC 119791
|||
Sbjct 111260 CTC 111258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588954951470200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |