Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_ 202017-07-27] 2,859 sequences; 56,328,106 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2483 93.3 3e-13 seq2604 91.5 1e-12 seq2075 91.5 1e-12 seq236 89.7 4e-12 seq2339 87.8 1e-11 >seq2483 Length=786084 Score = 93.3 bits (102), Expect = 3e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 390901 TTAACTAATTTTCTTTGGATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATA 390960 ||||| ||| || ||||||||||| || || ||||| || | |||||||| ||| | | Sbjct 711436 TTAACCAATCGTCGCTGGATATAACCTGTTTCGGCAGTCTTGACTGCAGTATCAATGAGA 711495 Query 390961 CCTTCTCTTCCTGCCATAACTTGGAAGAAAAATTCCATAGGATTGAGTCCA 391011 ||||||| || ||||| | |||||||||||||| ||||| |||| ||| Sbjct 711496 CCTTCTCGACCAGCCATGGCGTGGAAGAAAAATTCGCTAGGAGTGAGACCA 711546 >seq2604 Length=165848 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || || || || || ||||||||||| || |||||||| | || Sbjct 137817 ACTGTCCCCGCCTACTTCAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTCTCATC 137876 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || || ||||| || || ||||| || ||||||||||| || |||| || || Sbjct 137877 GCCGGTCTCAACGTTCTCCGAATCATCAACGAGCCTACTGCTGCCGCCATTGCCTACGGT 137936 Query 550529 CTTGATAA 550536 ||||| || Sbjct 137937 CTTGACAA 137944 >seq2075 Length=963506 Score = 91.5 bits (100), Expect = 1e-12 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063 ||| | ||||||||||| || ||||| ||||| ||| || || || ||||| ||| | Sbjct 910685 GATCTTGGAACCACATACAGCTGTGTCGGTGTGATGCAGAAGGGCAAGGTTGAGATTCTC 910744 Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 | ||| ||||| |||||| ||| ||||| ||||| || | ||||| || ||| | | Sbjct 910745 GTCAACGATCAGGGTAACCGAATCACTCCCTCTTACGTCGCCTTCACCGAGGATGAGCGT 910804 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTAT 550176 || ||||| || || || || | || ||| | | ||| || || || || || Sbjct 910805 TTGGTTGGAGACGCCGCCAAGAACCAGGCCGCCGCTAACCCCACGAACACCAT 910857 >seq236 Length=1699774 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 720790 CCATCCCTTCCTGCACGACCAATTTCTTGATAATATCCTTCAATATTTTTAGGTGCACCA 720849 ||||| || ||||| || ||| | || |||||||| ||||| | | || || |||| Sbjct 984553 CCATCTCTGCCTGCGCGGCCAGTCTCCTGATAATAGCCTTCCAGGCTCTTTGGAAGACCA 984612 Query 720850 TAATGTATAACTGCTCTCACATCACTTTTATTTATTCCCATTCCAAAAGCAATCGTCGCA 720909 | |||||||| |||||||||| || | || ||||||||||| || || || ||| Sbjct 984613 TGGTGTATAACGAATCTCACATCAGGCTTGTCAATACCCATTCCAAATGCGATTGTAGCA 984672 Query 720910 ACCATAACTTTAAc 720923 |||| ||||||||| Sbjct 984673 ACCACAACTTTAAC 984686 >seq2339 Length=1374216 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| ||||| || |||||||||||| ||| || ||| ||||| || || || |||| Sbjct 542414 GAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCG 542473 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| ||||| ||||| ||||| || || | ||||| |||||||| || || || Sbjct 542474 GCCGTCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCCTC 542533 Query 563376 TTTATCTTGAATTTTT 563391 || || ||||| ||| Sbjct 542534 CTTGTCCTGAATCTTT 542549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029144803185910