Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_
202017-07-27] 2,859 sequences; 56,328,106 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq2339 95.1 9e-15
seq2368 86.0 5e-12
>seq2339
Length=1374216
Score = 95.1 bits (104), Expect = 9e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || ||||| ||||||||||| ||| | || |||| || | |||||| ||||| ||
Sbjct 542723 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 542782
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| || || || || | ||| | |||||||||||| |||||| || |||
Sbjct 542783 AATCAAGCGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 542842
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | || || || | ||| ||||| | || || || || || ||||| || || ||
Sbjct 542843 GTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 542902
Query 48755 AAAAATCTGCAT 48766
|| ||||||||
Sbjct 542903 GAAGATCTGCAT 542914
>seq2368
Length=236445
Score = 86.0 bits (94), Expect = 5e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638
|| || || ||||| || || ||| |||| | || || | ||||||||| || || |||
Sbjct 97262 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 97321
Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||||||||| |||| ||||| ||||||||||||
Sbjct 97322 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 97356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380924326586457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |