Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_
202017-07-27] 2,859 sequences; 56,328,106 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2129 125 7e-24
seq2339 122 9e-23
>seq2129
Length=568468
Score = 125 bits (138), Expect = 7e-24
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540
||| | || || | ||| || | || ||||| || ||||| ||||| || |||||||||
Sbjct 361261 GCCATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAG 361320
Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600
|||| | |||| | || |||||||| ||||| ||||| || | |||||||| ||
Sbjct 361321 TCGCTCAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGTCGCTGCTGGTCA 361380
Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660
|| || ||||| || || || || || || ||||| ||| | |||||||| ||
Sbjct 361381 GGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGAC 361440
Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || || || || || || | || || |||||||| ||||| |||
Sbjct 361441 TCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 361497
>seq2339
Length=1374216
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || || || ||||| ||||||||||| ||
Sbjct 542688 CCACCACGGAGGCGGAGAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAG 542747
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| || |||||||| || ||||| || || ||
Sbjct 542748 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCAGGGGGG 542807
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||||| || || ||
Sbjct 542808 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 542867
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| || || || ||||| || |||||
Sbjct 542868 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 542914
Score = 116 bits (128), Expect = 4e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || || |||||||| ||||||||||||||| ||
Sbjct 542406 CCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCA 542465
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| ||||| || || || ||||| |||| |||||||| || || ||
Sbjct 542466 AGGGTTCGGCCGTCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 542525
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| ||| || || ||| | || |||||||| || ||
Sbjct 542526 ATACCCTCCTTGTCCTGAATCTTTGACTTAACATTGTCGATGGTATCGGACGACTCGACC 542585
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|| ||||| ||||| || || || | || || ||||
Sbjct 542586 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 542622
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | |||||||| || || || ||||| || ||||||||||||| | |||| ||
Sbjct 541959 AGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGA 542018
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || || || || | |||||||||||| || || || || ||
Sbjct 542019 CCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATACCCTCC 542078
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| || || || || || ||
Sbjct 542079 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTG 542138
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | ||| || || || || |||||
Sbjct 542139 ATGGTCTTTCCAGTGAGAGTCTTCACAAAGATCTGCAT 542176
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || |||||||| ||||||||||||||| || || | || || || ||
Sbjct 542201 GTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTG 542260
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || | ||||| |||||||| || || || || || || || || ||
Sbjct 542261 CTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 542320
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || || | || ||||| || || || || ||||||||||| || || ||
Sbjct 542321 GCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGT 542380
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| ||||||||
Sbjct 542381 GAGGGTCTTGACGAAGATTTGCAT 542404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505380338324680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |