Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233915.1_
202017-07-27] 2,859 sequences; 56,328,106 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1712 197 2e-45
seq2317 192 7e-44
seq2661 82.4 9e-11
>seq1712
Length=1031001
Score = 197 bits (218), Expect = 2e-45
Identities = 538/812 (66%), Gaps = 15/812 (2%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 111844 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 111785
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | || ||| | || | |||| | ||||||||
Sbjct 111784 AAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTG-CCAAGCGCGACAAGGAGACG 111726
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| |||||||||||| ||| || |||||||| |||| ||| |||
Sbjct 111725 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACA 111666
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || || |||| ||| ||||||| || || || | ||| | ||
Sbjct 111665 GGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATATCCTG 111606
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
|| ||| | ||| || | | ||| | || | || ||| || |||||| ||
Sbjct 111605 GATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 111549
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| |||||||| ||||| |||||||| || || |||||| |||||| ||||||||
Sbjct 111548 AGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAG 111489
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | |||||| || | || | ||| ||||||||| ||||| ||
Sbjct 111488 ACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 111429
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203
| ||||| |||| |||||||| ||||||||| | ||| | | ||| ||
Sbjct 111428 AGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGAT 111369
Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263
||||| | ||||| || ||| || |||| ||||| || || | |||||| | |
Sbjct 111368 GGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAGGTAGGT 111309
Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323
| | || || |||||||| | || ||||| || || || ||| ||||
Sbjct 111308 TCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGAT 111249
Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382
| | ||| || | ||| | ||||||| | || || ||| ||||| |||||
Sbjct 111248 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTC-G 111191
Query 130383 CTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 130441
| | ||| | | || ||||| ||||| ||||| ||| |||| || || ||
Sbjct 111190 CCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAGCGAAGAAAGCA 111131
Query 130442 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGA 130498
||||| | | ||| ||| |||| | ||| || | |||||||| | |||
Sbjct 111130 AGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCATGGAGA 111071
Query 130499 TCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
||||| || ||||| | |||||| ||||||||
Sbjct 111070 TCCTTGGAAAGATCAATCTCCTCAGCAGTCCA 111039
>seq2317
Length=1589273
Score = 192 bits (212), Expect = 7e-44
Identities = 1164/1842 (63%), Gaps = 43/1842 (2%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
|||||||||| || || |||| || || ||||||||||| || |||||||| |
Sbjct 797649 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGC 797708
Query 117865 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATG 117923
| |||||||| | | || | ||||| || | |||| | || || | ||||
Sbjct 797709 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 797767
Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983
|| ||||| ||||| ||||| |||||| || ||||| || ||||| | ||
Sbjct 797768 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 797827
Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043
|| | | ||| ||||| || ||| | || || ||| | ||| | |||||
Sbjct 797828 ACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAGAGCCTTGACATCGGCAGGGATG 797887
Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103
| || || || ||||| ||| | | | ||| | | ||||||| | | |||
Sbjct 797888 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 797947
Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163
|| ||||| || | || |||| | || |||||||| ||||||||
Sbjct 797948 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 798007
Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223
||||| |||| | ||||| |||| ||||| ||||| |||||||| ||||| |||
Sbjct 798008 GCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 798067
Query 118224 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 118283
| || |||| || ||| || ||||| || || | ||| || |||||||||| ||
Sbjct 798068 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCG 798127
Query 118284 TTTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341
| | | | | | | | || || ||| |||||||| || | | || | |
Sbjct 798128 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 798185
Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401
|||||| || |||||||||||||| | || || || || || | || || || |
Sbjct 798186 TCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGG 798245
Query 118402 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458
| ||||| ||| |||| | ||||| || |||||| ||||| || || || |
Sbjct 798246 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGGTAAATGGTCT 798302
Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 118517
| || || | || | | |||||| || || || | | || || | |
Sbjct 798303 CGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAGAGCA 798361
Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577
| || |||| || || || || ||||| || ||||| || || || | ||| |||
Sbjct 798362 AGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 798421
Query 118578 TTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 118637
|| ||||| || || || || ||| |||||| | | | || || || |
Sbjct 798422 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 798481
Query 118638 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TG 118694
||||||| ||| | || | ||| | | | || | || || ||| || | ||
Sbjct 798482 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGTTG 798538
Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754
| | || || || | || || || || || |||| | ||| || || |
Sbjct 798539 ATGAAAGAGGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAG 798598
Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814
||||| |||||||| ||||||| ||| || || ||||| || | ||||||||| ||
Sbjct 798599 TACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTG 798658
Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874
||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| |
Sbjct 798659 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCC 798718
Query 118875 TTGAGAATAGCCTTCCAGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932
| ||||| || | ||| | | ||| || | | ||| || | ||||| |
Sbjct 798719 TCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGATAGTCTTGCG-ACCCTTG-CCCTCCT 798776
Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992
|||||||||| ||| || || || ||||| || || | || | ||| || ||
Sbjct 798777 TCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGC 798836
Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052
|| | ||||| | || | ||| | || || ||||| ||||||||||| || |
Sbjct 798837 ACTCGTTGGGGCACATCAGCGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGAT 798896
Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112
| |||||||| || || ||| || || || || | || || | || || ||
Sbjct 798897 CAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCT 798956
Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172
|| | || | || || | || ||| | |||||| || || ||||| | || | |
Sbjct 798957 TGCGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAG 799016
Query 119173 -AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226
|| | ||| | | ||| |||||| ||||| | |||||| ||| || ||||
Sbjct 799017 CACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACAC 799073
Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATT 119284
||||||| |||| | ||| | ||| || || || || ||| || ||| | | |
Sbjct 799074 GAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCC--AGT 799131
Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344
|| | || | ||| | || || ||||||||| || ||| ||| ||||| || ||
Sbjct 799132 AGCACGGATACGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACA 799191
Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404
| ||||| | ||||||| || || || ||| |||| | | | | ||||||
Sbjct 799192 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCA 799251
Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464
|||| ||| ||| || || || ||||||||||| || || | || || ||||
Sbjct 799252 AGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGAA 799311
Query 119465 CA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGTG 119521
| | || ||||||| || ||| ||||||||||| || | || || || ||
Sbjct 799312 GAATTTGCT--GGACATCAGGTTGTATGTCTCCAAGACTCGCTCG-ATATCATCACCCCA 799368
Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 119581
|||||| | || || ||||| | ||||| || || || | | |||| || |
Sbjct 799369 AATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAAT 799428
Query 119582 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
| | ||||||| |||||| ||||||| ||||| ||
Sbjct 799429 CTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 799470
>seq2661
Length=413000
Score = 82.4 bits (90), Expect = 9e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 180879 CAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTT 180938
|| |||||||||||| || ||||| |||||||| || |||||| || ||| ||| ||||
Sbjct 255796 CAGCTTGGCACCGTAACCGTTGCGACCACCAACGGTTTTCTTCTCGTCGTCGTCGAAGTT 255737
Query 180939 TGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTG 180998
| || || | || || || ||| |||| || ||| | | || | ||||||||||||
Sbjct 255736 GGAACCCGCCAACAGATGTCCGAAGATAAGCTCAGGAATGTAGATCTTCTCCTTTTCGTG 255677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618413098672040
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