Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 163 4e-35
>seq2959
Length=1076507
Score = 163 bits (180), Expect = 4e-35
Identities = 581/899 (65%), Gaps = 18/899 (2%)
Strand=Plus/Minus
Query 63023 GATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 63082
||| || || | || | ||| || ||||| ||| || |||||||| || || |||||
Sbjct 630434 GATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 630375
Query 63083 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA 63141
||| | || || ||| |||| | || | ||| || | ||| | | || ||||||| |
Sbjct 630374 TGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA-GTTTCTGAGCCTTGA 630316
Query 63142 TTATAGATTTGTATCTCCTTTCTCTT----TCGTA--TAGAGTATACAATCGTTCGAACT 63195
| || ||| | |||| | || ||||| | ||| | | | |||||||
Sbjct 630315 T---AGTCTTGCGAC-CCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCC--TCGAACT 630262
Query 63196 CGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTC 63255
| ||||| | | | | | | ||| || || | || ||||||| || ||| || |
Sbjct 630261 CCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGCGTCCAGTCGC 630202
Query 63256 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63315
||| | | || || ||||| || |||||||| |||||||| || | || || || |
Sbjct 630201 CGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCAC 630142
Query 63316 TTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63375
| | ||||| || || ||||| ||||| |||||| | | | |||||
Sbjct 630141 GGGCACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAG 630082
Query 63376 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63435
| ||||| || || | ||| ||||| | | | || || || ||||| || ||||| || |
Sbjct 630081 AGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGA 630022
Query 63436 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCAT 63495
|| | ||| ||||| || | || | | ||| |||| || |||||| ||| |||| |
Sbjct 630021 CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGT 629962
Query 63496 TGGTACCGGAGATATAGCCTCCACTGGCACGAATAT--TACTAATTGATAGACCTATTCC 63553
||||||||| ||| ||| ||| | ||||| ||| | | || | |||| || ||
Sbjct 629961 TGGTACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCA--GACCAATACC 629904
Query 63554 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCT 63613
|| ||||| || ||||| | || || || | || || ||||| || || || ||
Sbjct 629903 ACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACT 629844
Query 63614 ATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATT 63673
|| || |||| | || | || || |||| |||| | ||| || || || ||
Sbjct 629843 GTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTT 629784
Query 63674 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63733
|| | || ||||| || || || || |||| || | || ||||| ||||| |
Sbjct 629783 GAAGAGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAA 629724
Query 63734 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63793
|| || ||||| ||| || || | |||||||| | ||||||||||||
Sbjct 629723 GACTCGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTGAGG 629664
Query 63794 TCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63853
| || ||||| || || || || | | ||| ||| |||||||| || || ||
Sbjct 629663 GCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCC 629604
Query 63854 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTAT 63912
||| || | |||| || || || || || | ||| | || | | || |||||||
Sbjct 629603 AAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAACTCCTCCTTAT 629545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629792832422880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |