Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1147 161 1e-34
>seq1147
Length=1368141
Score = 161 bits (178), Expect = 1e-34
Identities = 373/559 (67%), Gaps = 5/559 (1%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| || || | ||| || || || || || | ||| ||| ||| || |
Sbjct 1256343 GCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 1256402
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || || || || |||| || ||
Sbjct 1256403 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAA 1256462
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || || || || || | ||| | |||||| | | ||| | ||
Sbjct 1256463 GATACCCTCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTA-TCCT 1256521
Query 93271 -GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329
||||||| | ||||| ||||| || || || || || | || || || ||||
Sbjct 1256522 GGATCCATCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGT 1256581
Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389
|||| ||||| ||||| | | | || |||||| || || || | ||| || ||
Sbjct 1256582 TAAAGAGGTAGGTTCGCTGGGCGGGCTCCTTTATGTAGGTGTCAATGAGCAGGGAGTAGG 1256641
Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449
| || || |||| |||||||| || ||||| |||||||| || | ||| || | ||
Sbjct 1256642 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGA 1256701
Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509
|||| || || | |||| ||| ||||| || || ||||| |||||||| || || |
Sbjct 1256702 TCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAG 1256761
Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCC 93566
| || ||||| | || || | || | |||||| | | | | || | ||
Sbjct 1256762 CGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCC 1256821
Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626
| || ||||| || |||||||| | || || ||||||| || || || || || |
Sbjct 1256822 AGTCATGGAGATCCTTGGAAAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCT 1256881
Query 93627 TTTTGTACATATCCCATAT 93645
| |||||||| | ||| ||
Sbjct 1256882 TCTTGTACATTTGCCAAAT 1256900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556838901449040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |