Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1147 196 6e-45
seq2959 145 9e-30
>seq1147
Length=1368141
Score = 196 bits (216), Expect = 6e-45
Identities = 539/817 (66%), Gaps = 23/817 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| | || ||||||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 1256058 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 1256117
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || || ||||| | | || ||| | |||| |||| | |||
Sbjct 1256118 GAAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTG-----CCAAGCGCGACAAGG 1256172
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
|||||||| | |||| |||||||||||| ||| ||||||||||| |||| |||
Sbjct 1256173 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 1256232
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
||| || || || || || |||| ||| ||||||| || || || | |||
Sbjct 1256233 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 1256292
Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522
| || || | | | | || | | ||| | || | || ||| || |||
Sbjct 1256293 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CAG-GCA 1256349
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| |||||||| ||||| |||||||| || || |||||| |||||| |||
Sbjct 1256350 AAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 1256409
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | |||||| || | || | ||| ||||||||| |||
Sbjct 1256410 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 1256469
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702
|| ||| ||||| |||| ||||||| |||||||||| | ||| | | |||
Sbjct 1256470 TCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCAT 1256529
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGT 127762
|| ||||| | ||||| || ||| || |||| ||||| || || | ||||||
Sbjct 1256530 CGGATGGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAGG 1256589
Query 127763 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 127822
| | | | || || || ||||| | || ||||| || || || ||| |
Sbjct 1256590 TAGGTTCGCTGGGCGGGCTCCTTTATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAG 1256649
Query 127823 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 127881
|||| | | ||| || | ||| | ||||||| | || || ||| ||||| ||
Sbjct 1256650 TGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGAC 1256708
Query 127882 CTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 127940
||| | | ||| | | || ||||| ||||| ||||| ||| |||| || |
Sbjct 1256709 CTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAGCGAAGA 1256767
Query 127941 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 127997
| || ||||| | | ||| ||| |||| | ||| || | |||||||| |
Sbjct 1256768 AAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCAT 1256827
Query 127998 CGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||||||| || ||||| | |||||| ||||||||
Sbjct 1256828 GGAGATCCTTGGAAAGATCAATCTCCTCAGCAGTCCA 1256864
>seq2959
Length=1076507
Score = 145 bits (160), Expect = 9e-30
Identities = 1161/1848 (63%), Gaps = 55/1848 (3%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
|||||||||| || || |||| || || ||||||||||| || || ||||| |
Sbjct 631419 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTTTTGAGGC 631360
Query 115586 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644
| |||||||| | | || | ||||| || | |||| | || || | ||||
Sbjct 631359 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 631301
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
|| ||||| ||||| ||||| |||||| || ||||| || ||||| | ||
Sbjct 631300 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 631241
Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
|| | | ||| ||||| || || | || || ||| | ||| | |||||
Sbjct 631240 ACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAGAGCCTTGACATCGGCAGGGATG 631181
Query 115765 TCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTT 115821
| || || || || || ||| | || ||| || | | ||||||| | |
Sbjct 631180 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCG 631124
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAA 115877
||||| ||||| || | || |||| | | ||| | |||||||| ||
Sbjct 631123 GACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGG----TTGACAACCTGGAA 631068
Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937
|||||| ||||| |||| | |||||||||| ||||| ||||| |||||||| ||
Sbjct 631067 CTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTT 631008
Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997
||| |||| || |||| || ||| || ||||| || || | ||| || ||||| ||
Sbjct 631007 GTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACG 630948
Query 115998 GAGACCCACCCCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTC 116055
|| || | | | | | | || || | | |||||||| || | | |
Sbjct 630947 GATGCCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGC 630890
Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115
| | | |||||| || |||||||||||||| | || || || || || | || ||
Sbjct 630889 TTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTG 630830
Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172
|| || ||||| ||| |||| | ||||| || |||||| ||||| ||
Sbjct 630829 GAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGGTAA 630773
Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
|| ||||| || || | || | | |||||| || || || | | ||
Sbjct 630772 ATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG- 630714
Query 116233 CACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291
|| | || || |||| || || || || ||||| || ||||| || || || | |||
Sbjct 630713 CAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCAT 630654
Query 116292 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351
||| || ||||| || || || || ||| |||||| | | | || || ||
Sbjct 630653 GTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 630594
Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411
| ||||||| ||| | || | ||| | | | || | || || ||| ||
Sbjct 630593 ACGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAGCCTCATC 630537
Query 116412 AT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 116468
| ||| | || || || | || || || || || |||| | ||| ||
Sbjct 630536 GTAGTTGATGAAAGAGGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGG 630477
Query 116469 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 116528
|| |||||| |||||||| || |||| || || || ||||| || | ||||||
Sbjct 630476 GGCACAGTACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTT 630417
Query 116529 TTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGT 116588
||| || ||| ||| || ||||||||||||||||| |||| | || ||||| ||
Sbjct 630416 TTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGT 630357
Query 116589 TTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCG 116645
|||| || ||||| || | ||| | || | | || | | || | ||| || |
Sbjct 630356 CTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG-ATAGTCTTGCG-ACCCTTG 630299
Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704
||||||| |||||||||| ||| || ||||| ||||| || || ||| || | ||
Sbjct 630298 -CCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC-TCCGTAGCAGTCGGCGA 630241
Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764
| || || || | || || | || | ||| | || || ||||| |||||||
Sbjct 630240 GGCCAGGGCACTCGTTGGGGCACATCAGCGTCCAGTCGCCGTTCTTTTCAACACGCTTCA 630181
Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824
|||| || || |||||||| || || ||| || || || || | || || | |
Sbjct 630180 TGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTAC 630121
Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884
| || || ||| | || | || || | || ||| | |||||| || || ||||| |
Sbjct 630120 CGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGA 630061
Query 116885 CCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTA 116940
|| | | ||| | || | | ||| |||||| ||||| | || || |||
Sbjct 630060 TGGCAAAAGCACCGGGTCGCTTGTTG-CCACCCTGGTCGACATAGCGAGCAGTGTTGTTG 630002
Query 116941 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAG 116998
|| || |||||||| |||| | ||| | ||| || || || || ||| || |||
Sbjct 630001 AAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGTAGGAG 629942
Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058
| | || | || | ||| | || || ||||||||| || ||| ||| |||||
Sbjct 629941 CC--AGTAGCACGGATACGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGAGATCA 629884
Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118
|| || | ||||| | ||||||| || || || ||| |||| | | | |
Sbjct 629883 TGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCA 629824
Query 117119 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGT 117178
|||||| |||| ||| ||| || || || ||||||||||| || || | || |
Sbjct 629823 AGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCAT 629764
Query 117179 GGATGAACA--TACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTC 117236
| |||| | | || ||||||| | ||| ||||||||||| || || ||
Sbjct 629763 GTGTGAAGAATTTGCT--GGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATC 629706
Query 117237 CCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACC 117296
|| |||||| | || || ||||| | ||||| || || || | | ||||
Sbjct 629705 ACCCCAAATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACC 629646
Query 117297 ATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344
|| | | | ||||||| |||||| ||||||| ||||| ||
Sbjct 629645 GTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 629598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613483073829360
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