Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_ 202017-07-27] 3,146 sequences; 56,132,059 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2959 233 2e-56 seq1147 147 3e-30 seq2926 87.8 2e-12 >seq2959 Length=1076507 Score = 233 bits (258), Expect = 2e-56 Identities = 1134/1782 (64%), Gaps = 39/1782 (2%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || | | ||||| || || ||||| || || Sbjct 629663 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGT 629722 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || ||||||| | | |||| || || | || || ||||| Sbjct 629723 CTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATGCCTCTCCCACGCTCTT 629782 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || || |||||| |||| ||| ||| | ||| | ||||| || Sbjct 629783 CAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGA 629842 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||||||| |||||| ||||| ||| |||||| Sbjct 629843 CAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 629902 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 |||||| || || || | || | || | || | | ||| || | | ||||| Sbjct 629903 TGGTATTGGTCTGAACGTGCACCGTATCCGTGCTACT--GGCTCCTACATCGCCGGTACC 629960 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| ||| | ||| || |||| |||||||| || || ||| ||| || |||||| Sbjct 629961 AACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTAT 630020 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || || | || |||| || ||||| ||| Sbjct 630021 GTCGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGG 630077 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 630078 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGT 630137 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| || || ||| ||| || ||||| || ||||| ||||||||| | ||||| || Sbjct 630138 GCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAG 630197 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | ||| | ||| | || | || || || || || || ||| |||| | || Sbjct 630198 AACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGA 630257 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGG 112260 |||||||| || || || ||| ||||||||| |||| | | | | | | || ||| Sbjct 630258 GAGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCAAGGGTC-GCAAGACTA 630315 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | | ||| | || ||||| || | || || ||||| || | |||| Sbjct 630316 TCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCAT 630375 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||||| |||| ||||| || |||||||| | ||| ||| Sbjct 630376 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCC 630435 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || |||||||| || || ||||| | || | | | || ||| ||||| | Sbjct 630436 GAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGTCT 630495 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT---- 112496 | ||||| || || | ||||| ||| | | | || || || | || || Sbjct 630496 GCAACCTTGCCTCTCTGGCTCTGCCC---TCT-TTCAT-CAACTACGATGAGGCTTGCTA 630550 Query 112497 -GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 || | | || | ||| | || | | ||| | ||||| |||| | || Sbjct 630551 CGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGTAACCTGAACAAGATCAT 630610 Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 ||| || ||||| || || ||||| || ||| ||| | ||||| || || Sbjct 630611 CGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCAT 630670 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATT 112674 |||||| ||||| || || || || |||| ||| || || || ||| | || || | Sbjct 630671 TGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGAGT 630729 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 | ||| || || |||| || || || ||||| || || ||||| || || Sbjct 630730 CACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTCA 630789 Query 112735 AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || | || |||| ||| || ||||| || ||||| | ||||| || | Sbjct 630790 CTGCCTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCCCG 630849 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACT 112854 | || | || | || || || || |||||| | | || || | || |||| Sbjct 630850 CCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 630909 Query 112855 GGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 |||| ||| || || | | | ||||| | || | ||||||||||| | | || Sbjct 630910 GGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTGCTCCTTGC 630967 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 || ||||| || ||| ||| | || || |||| || || || ||||| || ||||| Sbjct 630968 TCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTA 631027 Query 112973 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 113032 ||| | |||||||| | || | ||||| || ||||| | |||||||| Sbjct 631028 CACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTG 631087 Query 113033 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092 || | | ||||| || || ||||| |||||| | | ||||||| | | ||| | Sbjct 631088 GCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCAT 631147 Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152 | | |||||||||||| || ||| | || || | || | ||| |||| Sbjct 631148 TGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTA 631207 Query 113153 CCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCG 113212 || |||||||| ||| | | ||| || | ||||| || ||||| ||| Sbjct 631208 TAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGTGC 631267 Query 113213 CTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAG 113270 ||||||||||| |||| ||| |||| | |||| | || |||||| |||| Sbjct 631268 CTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGGCAAG 631325 Query 113271 CTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329 || | ||||||| | | || | |||||| || |||||||| || ||||| ||||| Sbjct 631326 ATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAAACTGGCATGTACTACCT 631384 Query 113330 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371 || | |||| || || |||||||||| | |||| Sbjct 631385 TCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 631426 >seq1147 Length=1368141 Score = 147 bits (162), Expect = 3e-30 Identities = 180/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 |||||| | ||||| | || | || || || | |||||| || || ||||| || Sbjct 1256588 CTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGA 1256529 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | | || | | | | ||||||| |||| ||| | || || || |||||| Sbjct 1256528 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGA 1256470 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||| |||| ||||| | |||| | |||||||||||||| |||||||| Sbjct 1256469 GGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 1256410 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| ||||| ||||||||||||||| ||||||||||| ||||| || ||| || || Sbjct 1256409 GCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTT 1256350 Query 102329 TGC 102331 ||| Sbjct 1256349 TGC 1256347 >seq2926 Length=362871 Score = 87.8 bits (96), Expect = 2e-12 Identities = 181/267 (68%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178 ||||| || || || ||||||||||| || ||||| || ||||| |||| | || | Sbjct 10125 AAGAGCTCACGGACTCGCTTGGCGCCAACGCCAACGAATATCTCGTCAAA-CTCGCTACC 10183 Query 16179 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 16237 |||| | || ||||| ||| | ||| || |||| ||||| || ||||| ||||| Sbjct 10184 AGACATGTAGAAAAAGGGAACACCGGCTTCGCCGGCAACAGCTCGAGCAAGAAGCGTCTT 10243 Query 16238 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAA 16297 ||| ||||| || ||| | |||||| | || || | || || ||| | Sbjct 10244 ACCAGTACCAGGAGGACCAACCAGGAGGACGCCCTTGGGCAGTTTAGCACCAAGATCGCT 10303 Query 16298 GTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTC 16357 | | | || || | ||| ||||| || |||| |||| | ||| |||||||| | || Sbjct 10304 GAACTTTTCGGGATTCTTCAGAAACTCTACAACTTCTTGGAGTTCCTCTTTGGCTTCATC 10363 Query 16358 AATCCCCTCAACATCGGTAAACCGAGT 16384 | || | ||||||| | |||||||| Sbjct 10364 ACAACCGTGAACATCGCTGAACCGAGT 10390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620717989305120