Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 251 8e-62
seq591 107 2e-18
seq1147 86.0 7e-12
>seq2959
Length=1076507
Score = 251 bits (278), Expect = 8e-62
Identities = 1085/1692 (64%), Gaps = 59/1692 (3%)
Strand=Plus/Minus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466
||||| || ||||| || |||||||| ||| |||||| || | || | ||||| |
Sbjct 631387 CGAAGGTAGTACATGCCAGTTTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 631329
Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526
|| ||| | || || || ||| | ||||| ||||| |||||||| |||||
Sbjct 631328 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 631269
Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582
||| |||||||| ||||| | | || ||| ||| | | ||||| || |
Sbjct 631268 GGCACCTCGATCAGCAGCCATCTGAACGA----CTTGGCGCTGAGAGATCTCCCAAACGG 631213
Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639
|||| |||| | ||||| ||| | || |||| ||||| ||||| || |||
Sbjct 631212 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 631153
Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699
|||| | | || | | |||||| | | ||||| ||||| | | | || | ||
Sbjct 631152 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 631099
Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756
| || || | ||||| || || |||||||| || ||||| ||||||
Sbjct 631098 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGTCGTTGGTAGA 631039
Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816
|||| | |||||||| ||||| ||||| |||||||| || || || | || || |
Sbjct 631038 TGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 630979
Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876
| ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || |
Sbjct 630978 TAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 630919
Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936
| ||||| || | | || | || | | |||||| || || |
Sbjct 630918 GAGTCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 630865
Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996
| | |||||||| || || ||||| ||||| | ||| | ||||| ||| ||||
Sbjct 630864 GGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 630805
Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055
|| | | | || | | || || || || || || ||||| || || || || ||
Sbjct 630804 GCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGC---TTGTTG 630749
Query 110056 AGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAG 110111
|| |||| ||| | |||||||| | | || || || || |||| || ||
Sbjct 630748 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAG 630690
Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171
||||||||||| ||||||||||| || || ||||||| | ||||| | ||
Sbjct 630689 GCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGAC 630630
Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231
||||| ||| ||||||| | || || || | ||| || ||| |
Sbjct 630629 AGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTACGAATAACAACCTGACTGACCTT 630570
Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAA 110290
|| | || | | | ||| | | | || | || |||| | ||| ||||| |
Sbjct 630569 GTGCAACTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAAGAGGGCAGAGCCA 630511
Query 110291 TAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTAC 110350
||| ||||| ||||| |||| |||||| | | ||| || | |||||| || |
Sbjct 630510 GAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGTGC 630451
Query 110351 ACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCAT 110410
||| |||||| || ||| ||| | |||||| || || ||| |||||| ||||
Sbjct 630450 ACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCAT 630391
Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470
|||| ||||||||| ||||| | || || || ||||| | || |||||||| | ||| |
Sbjct 630390 CCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA 630331
Query 110471 CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAA 110528
| || || ||| |||| | | || |||| ||||||||| |||||
Sbjct 630330 GTTTCTGAGCCTTGATAGTCTTGCG--ACCCTTGCCCTCCTTCTCGTACTTTTCGTACAG 630273
Query 110529 GTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAG 110588
|||| || |||| |||||| || | || || || || ||| || | ||
Sbjct 630272 AGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAG 630213
Query 110589 GGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGA 110648
| ||| | || || ||||| | ||||||||| || ||||| ||||| | ||
Sbjct 630212 CGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAG 630153
Query 110649 GAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708
||||||||||||| ||| |||| || | ||| ||||| || || || | || ||
Sbjct 630152 GAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTC 630093
Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGACG 110762
| || ||| |||||||| || ||||| ||| | ||| || || ||| | |
Sbjct 630092 GAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG 630035
Query 110763 ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCC 110822
|| |||||| |||||||| || ||| |||||||| | |||||||||| || ||
Sbjct 630034 -CCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACC 629976
Query 110823 ATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATG 110882
| ||| ||| || ||||| || ||| | | ||||| || ||| | |
Sbjct 629975 GTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTT 629916
Query 110883 CATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAA 110941
|| |||||||||||| ||| ||| || ||||| ||| |||| ||| | || |
Sbjct 629915 CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGA 629857
Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001
| || ||||| || |||| | ||| | |||||||| |||| || || |||
Sbjct 629856 TTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAG 629797
Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTT 111059
| || || || |||||||| || || | ||||| ||| ||| ||| |||||||
Sbjct 629796 GGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGA--AGAATTTGCTGGACATCAG 629739
Query 111060 GTTGTATGTGTC 111071
||||||||| ||
Sbjct 629738 GTTGTATGTCTC 629727
>seq591
Length=518861
Score = 107 bits (118), Expect = 2e-18
Identities = 251/373 (67%), Gaps = 18/373 (5%)
Strand=Plus/Minus
Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651
||||||||||||||| ||||||| |||||| | || ||| ||||||||||||
Sbjct 148502 GAAACCGTCCATTTCAGTGAGAATCTGGTTCAGAGTTGCTTCCCGCTCATCGTTGCCAC- 148444
Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACA-------GCGTCAATCTCATCGATGAATA 11704
|| | | || |||| | | | | | || |||||||||||||| ||||| |
Sbjct 148443 CAAATCCCCGGCCGCTCTCCTGTCGCGCACGTCCAATTGCGTCAATCTCATCAATGAAGA 148384
Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764
||| || || ||| |||| | | |||| | || | ||||| | || |
Sbjct 148383 TGATGCAAGGGGCGTTCTTACGTCCTTCGGCGAACAAATCTCTCACACGTGAAGGACCGA 148324
Query 11765 CACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGA 11822
|||| || ||||| |||||||| | | | || | ||||||| ||| || || |||
Sbjct 148323 CACCGACAAACATTTCAACGAACTCAGAACCGCTCA-CACTGAA-GAATGGTACTCCAGA 148266
Query 11823 CTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882
||| || || |||| || || | ||||||||| |||||||| | |||||| | |
Sbjct 148265 CTCGCCGGCCGTGGCCTTGGCAAGCAAAGTCTTACCGGTACCAGGAGGACCAGCTAAGAT 148206
Query 11883 GGCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939
|| || || |||||||||||||| || | || | ||| |||| ||| |||||
Sbjct 148205 AGCACCTCGAGGGATCTTGGCACCTAGCTTTTCGAATT---TCTCGGGCTGCTTCAGGAA 148149
Query 11940 GTCCACAATCTCC 11952
| ||||| ||||
Sbjct 148148 GCTCACAAACTCC 148136
>seq1147
Length=1368141
Score = 86.0 bits (94), Expect = 7e-12
Identities = 206/303 (68%), Gaps = 9/303 (3%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || ||||| || ||||| |||||||||||||| || |||| || ||
Sbjct 1256346 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 1256405
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||||| || | ||||| ||||| ||||| | || ||| ||||||||
Sbjct 1256406 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGAT 1256465
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670
||||| ||| |||||||| | ||||||| || ||||| ||| ||| || ||
Sbjct 1256466 ACCCTCAACAGCAGCGAAAGCAACGAGACGCTGGGC-AAAGGAGGAGTCCTTATCCTGGA 1256524
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGC-TTC 119728
||| || ||||||| |||||| | || |||||||||| || | ||||| ||
Sbjct 1256525 TCCATCGGATGGCCCAGTCGGCCTT-CTTTCGGATGCAGGGGATGGTCTCAATGGCGTTA 1256583
Query 119729 GAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788
| | || | ||| | || ||||| || || | |||||||| ||||||||
Sbjct 1256584 AAGAGGTAGGTTC-GCTGGGCGGGCTCCTTTATGTAGGTGTCAATGAGCAGGGAGTAGGT 1256642
Query 119789 CTC 119791
|||
Sbjct 1256643 CTC 1256645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588952838518800
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