Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 197 2e-45
seq1147 134 2e-26
seq2715 82.4 9e-11
>seq2959
Length=1076507
Score = 197 bits (218), Expect = 2e-45
Identities = 1135/1783 (64%), Gaps = 57/1783 (3%)
Strand=Plus/Minus
Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610
|||| | |||||||||| || || |||| | || || |||||||| || ||
Sbjct 631426 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTT 631367
Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669
||||| || | ||||| || | || | |||||| | || |||| |||||| ||
Sbjct 631366 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 631308
Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727
| |||| | |||| ||| |||| | ||||||||| ||| || | || |||
Sbjct 631307 CTTCATGTGGATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 631250
Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787
|| | || ||| | | ||| ||||| || || || ||| ||||| |||
Sbjct 631249 ATCTGAACGACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAGAGCCTTGACATCG 631190
Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844
| ||||| | | || || ||||| ||||| | | || ||| || | | ||||
Sbjct 631189 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 631133
Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904
||| | | |||||| ||||| || | || || |||| || |||||||| |
Sbjct 631132 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 631073
Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964
||||| || ||||| | || | |||||||| | |||||||| || |||||
Sbjct 631072 TGGAACTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 631013
Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024
|| || || |||| || || | ||| ||| || ||||| || || | | ||||||
Sbjct 631012 TCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 630953
Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079
||||| | || | | ||||| ||||| ||| | |||||||| || | |
Sbjct 630952 TTACGGATGCCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 630896
Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139
| || || || |||| |||| || || || || | || | || | ||| ||||| |
Sbjct 630895 GAG-GGCTTGACGTTCC-ACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACCTT 630838
Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198
|| || |||| ||| | | | ||||| | ||| | || |||| |||
Sbjct 630837 TGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 630779
Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258
|| || ||||| || ||||| | || | ||| || || ||| || || |
Sbjct 630778 TGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGC 630719
Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317
||| || | || || |||| || || || |||||||| | |||||| |||| |||
Sbjct 630718 ATGCG-CAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 630660
Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377
||||| ||| || || || || || || || || || |||| |||
Sbjct 630659 GCGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTT 630600
Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAG 106436
|| || |||||| || ||| | || || || || | | || | || ||
Sbjct 630599 CAGGTTACGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA-AGTCGTA---GCAAG 630544
Query 106437 TCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 106493
||| || | ||| | || || || | || || | ||||| ||||| ||
Sbjct 630543 CCTCATCGTAGTTGATGAAAGAGGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGACCT 630484
Query 106494 CATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCA 106553
| || | |||||| | |||||| || |||| |||||| || || || || |
Sbjct 630483 CGTCAGGGGCACAGTACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGA 630424
Query 106554 AATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 106613
||||||||||| ||||| |||||| |||||||||||||||||| | || | || |
Sbjct 630423 GGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGG 630364
Query 106614 TCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGCTGG-TACAATGGCGTT 106671
|||| ||||| | || ||||| || | ||| | | | | | || | || | |||
Sbjct 630363 TCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGATAGTCTTGCGA- 630305
Query 106672 GGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGT 106730
||| | |||||| |||||||||| ||| || || || |||||||| || ||
Sbjct 630304 --CCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGT 630247
Query 106731 CGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCC 106790
||| ||| || || || || || || | || | ||| | || || ||||| |
Sbjct 630246 CGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGCGTCCAGTCGCCGTTCTTTTCAACAC 630187
Query 106791 GCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTA-CACCGAGCCT 106847
||||||||||||| || || ||||| |||| | |||||| || | ||| || |||
Sbjct 630186 GCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGG--TCACGGGCACGGA-CCT 630130
Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907
| || | ||| ||||| || | ||||||||||| | || ||| | |||||| ||||
Sbjct 630129 CCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCT 630070
Query 106908 CAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTG 106964
| || |||| || | || || ||| ||| | || | |||||||| || |
Sbjct 630069 CGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATAGCGAGCAG 630010
Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA 107023
|| ||| || || |||||||| |||| || ||| | ||| ||| || || || |||
Sbjct 630009 TGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGA 629950
Query 107024 -ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 107082
|| ||| | | || | | | || | || || |||||||| |||||| |||
Sbjct 629949 TGTAGGAG--CCAGTAGCACGGATACGGTGCACGTTCAGACCAATACCACCAGCCATCTT 629892
Query 107083 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142
||||| ||||| | | ||||| | ||||| || | || ||| ||||| |
Sbjct 629891 GGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCAT 629832
Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202
| | | ||||||| |||| || || || || || || |||||||| || ||
Sbjct 629831 ATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGG 629772
Query 107203 TGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260
| || || |||| | | || ||||||| || ||||||||||||||| ||
Sbjct 629771 AGAGGCATGTGTGAAGAATTTGCT--GGACATCAGGTTGTATGTCTCCAAGACTCGCTCG 629714
Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
|| || || || || || | | ||||||||| | |||||
Sbjct 629713 ATATCATCACCCCAAATACCAACAGACACACGCATGATCATGT 629671
>seq1147
Length=1368141
Score = 134 bits (148), Expect = 2e-26
Identities = 336/504 (67%), Gaps = 20/504 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| ||| ||||| ||||| |||||
Sbjct 1256059 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 1256118
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAGG 117099
||||| || || || | || || ||| | | || || | | || |||
Sbjct 1256119 AAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTGCCAAGCGCGACA------AGG 1256172
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|||||||| | || |||||||||||| ||| ||||||||||| |||| ||
Sbjct 1256173 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 1256232
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
||| || || || || || |||| | | |||||| || || || | | |||
Sbjct 1256233 GCACAGGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 1256292
Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| ||||| | | | ||| | | || | || | || ||| || ||||
Sbjct 1256293 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 1256349
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| ||||||||||| || || || || || || |||||| || || |||
Sbjct 1256350 AAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 1256409
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396
|||||||| |||||||| | ||| | |||| | ||| | || |||||||||||||
Sbjct 1256410 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 1256469
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455
|| ||| || || |||| || |||| ||| |||||| ||| | || | | | |||
Sbjct 1256470 TCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCA 1256528
Query 117456 TTTCATTGCCCATTTCGCCTTCTT 117479
| || ||||| | ||||||||
Sbjct 1256529 TCGGATGGCCCAGTCGGCCTTCTT 1256552
>seq2715
Length=1372167
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || |||| || ||||| ||||||||| |||||| ||| | || || |
Sbjct 303324 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 303265
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| || ||| |||| || || | ||||| ||| | |||||||| || ||
Sbjct 303264 GTGTCATCGATGCCGATTACCGCGGCCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 303205
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||||||||||| ||| | || || ||||| || |||||||| || ||||||
Sbjct 303204 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 303152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589957599005040
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