Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq380 96.9 3e-14
seq1669 93.3 3e-13
seq3070 91.5 1e-12
seq202 89.7 4e-12
>seq380
Length=1607400
Score = 96.9 bits (106), Expect = 3e-14
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||| ||||| || |||||||||||| ||| || ||| ||||| || || || ||||
Sbjct 982749 GAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCG 982690
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||||| ||||| ||||| ||||| || || | ||||| |||||||| || || ||
Sbjct 982689 GCCGTCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCCTC 982630
Query 563376 TTTATCTTGAATTTTT 563391
||||||||||| |||
Sbjct 982629 CTTATCTTGAATCTTT 982614
>seq1669
Length=665512
Score = 93.3 bits (102), Expect = 3e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 390901 TTAACTAATTTTCTTTGGATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATA 390960
||||| ||| || ||||||||||| || || ||||| || | |||||||| ||| | |
Sbjct 94720 TTAACCAATCGTCGCTGGATATAACCTGTTTCGGCAGTCTTGACTGCAGTATCAATGAGA 94779
Query 390961 CCTTCTCTTCCTGCCATAACTTGGAAGAAAAATTCCATAGGATTGAGTCCA 391011
||||||| || ||||| | |||||||||||||| ||||| |||| |||
Sbjct 94780 CCTTCTCGACCAGCCATGGCGTGGAAGAAAAATTCGCTAGGAGTGAGACCA 94830
Score = 91.5 bits (100), Expect = 1e-12
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || || || || || ||||||||||| || |||||||| | ||
Sbjct 374548 ACTGTCCCCGCCTACTTCAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTCTCATC 374607
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || || || ||||| || || ||||| || ||||||||||| || |||| || ||
Sbjct 374608 GCCGGTCTCAACGTTCTCCGAATCATCAACGAGCCTACTGCTGCCGCCATTGCCTACGGT 374667
Query 550529 CTTGATAA 550536
||||| ||
Sbjct 374668 CTTGACAA 374675
>seq3070
Length=1118814
Score = 91.5 bits (100), Expect = 1e-12
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063
||| | ||||||||||| || ||||| ||||| ||| || || || ||||| ||| |
Sbjct 922984 GATCTTGGAACCACATACAGCTGTGTCGGTGTGATGCAGAAGGGCAAGGTTGAGATTCTC 922925
Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123
| ||| ||||| |||||| ||| ||||| ||||| || | ||||| || ||| | |
Sbjct 922924 GTCAACGATCAGGGTAACCGAATCACTCCCTCTTACGTCGCCTTCACCGAGGATGAGCGT 922865
Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTAT 550176
|| ||||| || || || || | || ||| | | ||| || || || || ||
Sbjct 922864 TTGGTTGGAGACGCCGCCAAGAACCAGGCCGCCGCTAACCCCACGAACACCAT 922812
>seq202
Length=734607
Score = 89.7 bits (98), Expect = 4e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 720790 CCATCCCTTCCTGCACGACCAATTTCTTGATAATATCCTTCAATATTTTTAGGTGCACCA 720849
||||| || ||||| || ||| | || |||||||| ||||| | | || || ||||
Sbjct 609262 CCATCTCTGCCTGCGCGGCCAGTCTCCTGATAATAGCCTTCCAGGCTCTTTGGAAGACCA 609203
Query 720850 TAATGTATAACTGCTCTCACATCACTTTTATTTATTCCCATTCCAAAAGCAATCGTCGCA 720909
| |||||||| |||||||||| || | || ||||||||||| || || || |||
Sbjct 609202 TGGTGTATAACGAATCTCACATCAGGCTTGTCAATACCCATTCCAAATGCGATTGTAGCA 609143
Query 720910 ACCATAACTTTAAc 720923
|||| |||||||||
Sbjct 609142 ACCACAACTTTAAC 609129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029129625331540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |