Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 208 9e-49
seq1147 134 2e-26
seq2715 82.4 9e-11
>seq2959
Length=1076507
Score = 208 bits (230), Expect = 9e-49
Identities = 1139/1783 (64%), Gaps = 55/1783 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| ||||| ||||||| || | | || || || || || || || ||
Sbjct 629663 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGT 629722
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| || ||||||| || | | |||| || || | || || |||
Sbjct 629723 CTTGGAGACATACAACCTGATGTCC--AGCAAATTCTTCACACATGCCTCTCCCACGCTC 629780
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || || || || || || |||| ||||||| | | | | |||||
Sbjct 629781 TTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 629840
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | || ||||| | ||||| | | ||||| ||||| ||| ||||
Sbjct 629841 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 629900
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506
|| |||||||| || || | || | | | || | | ||| || ||| || |
Sbjct 629901 GGTGGTATTGGTCTGAACGTGCACCGTATCCGTGCTACTGG--CTCCTACATCGCCGGTA 629958
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
| || ||| ||| | ||| || |||| |||||||| || || ||| ||| || ||||
Sbjct 629959 CCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCT 630018
Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622
|||| | || | | ||| | || | ||| | | || ||||| | || || |||
Sbjct 630019 ATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 630077
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| | ||| || | ||||||||||| | || ||||| ||| | || |||| || |
Sbjct 630078 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGG-TCCG 630136
Query 75683 TGTA-GAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| | || || |||| || ||| ||||| || || |||||||||||||| |||||
Sbjct 630137 TGCCCGTGACCT--TTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAA 630194
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| || | ||| | || | || || || || || || ||| |||||
Sbjct 630195 AAGAACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 630254
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCG 75856
|| |||||||| || || || ||| |||||| || ||||||| | | ||| |
Sbjct 630255 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAA---G 630311
Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
||| | | || | | || ||||| | || ||||| | | ||||| ||||| ||||
Sbjct 630312 ACTAT-CAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAA 630370
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|||| ||||| ||||||||||| || ||| ||||| ||||||||||| | || ||
Sbjct 630371 CCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTAC 630430
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||| ||||| || || ||||| |||||| | |||||| | || ||| ||
Sbjct 630431 CATCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGC 630490
Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCAC 76092
||| ||||| | || || | || || || | |||| || ||| || ||
Sbjct 630491 TGTCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCATCAACTACGATGAGGCTTGC-- 630548
Query 76093 TTTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151
| || | | || || || || | ||| || |||||| || || |||
Sbjct 630549 -TACGACT-TCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGTAACCTGAACAAGA 630606
Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
|||| || || || || || || || || || ||| ||||| ||| |||
Sbjct 630607 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 630666
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCATTT 76270
| |||||| | |||||||| || || || |||| || || | ||| | | | ||
Sbjct 630667 CCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGCATGCCC-TTC 630725
Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330
|| ||| || || ||| | || | ||||| || ||||| || ||||| ||
Sbjct 630726 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCC 630785
Query 76331 CTGGAGGCGAGTTGTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
|| || ||| | ||||| | | | ||| |||| || || | |||||
Sbjct 630786 CTCACTGCCTCC-GTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTC 630844
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449
||||| || | || | || ||||| || |||||| || || || || || | ||
Sbjct 630845 CCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGG-AACGTCAAGCCCT-CTGACCTC 630902
Query 76450 CG--ACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
| ||||||| | ||| ||||| ||||| | || | |||||||||||
Sbjct 630903 TGGGACTGGGAGACTCTTCGAGAGGAAG---TCAAGACACACGGCATCCGTAACAGTCTG 630959
Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564
| | || || ||||| || ||| ||| | || || |||| || || || |||||
Sbjct 630960 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTC 631019
Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624
|| || ||||| | |||||||||| || | ||||| |||||||| |||||
Sbjct 631020 GAGCCCTACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTC 631079
Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684
||| || |||| ||||| | || ||||| |||||| | | ||||||| |
Sbjct 631080 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 631139
Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744
| ||| | | | |||||||||||| || || | | ||||| | ||| |||||
Sbjct 631140 CGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 631199
Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804
||| || || || ||||| ||| | | ||| || | ||||| || |||
Sbjct 631200 GCTCTGTATAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGAT 631259
Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862
|| ||| ||||||||||| |||| ||| |||| | |||| | || ||||
Sbjct 631260 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 631317
Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921
|| |||| || | |||||| | || | || ||||| | || |||||||| || |||
Sbjct 631318 TGGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAAACTGGCATG 631376
Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964
||||| || || || |||| || || ||||||||||
Sbjct 631377 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 631419
>seq1147
Length=1368141
Score = 134 bits (148), Expect = 2e-26
Identities = 336/504 (67%), Gaps = 20/504 (4%)
Strand=Plus/Minus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| | ||||| || |||| | | | || | ||| |||||| ||| ||||
Sbjct 1256552 AAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 1256494
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141
|| |||| || || ||| ||||||||||||||| || | ||| | |||| |
Sbjct 1256493 TCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTT 1256434
Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201
||| | |||||||| ||||||||||| || || |||||| || || || || || ||
Sbjct 1256433 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCG 1256374
Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258
||||||||||| ||| || |||||| || ||| || | || | || | |
Sbjct 1256373 TGATGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 1256317
Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318
||| | | | ||||| | ||| | | || || || |||||| | | |||
Sbjct 1256316 TGCCAGCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTT 1256257
Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378
| || || || || || ||| || |||| ||||||||||| ||| ||||
Sbjct 1256256 CCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTA 1256197
Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG-GGGTGCCACCCA-----TTTG 65432
|||||||| || | ||||||||||| || | | || || | | |||
Sbjct 1256196 CATTGAGTTCGTCGCTGATCGTCTCCT------TGTCGCGCTTGGCAACGAGAAGGTTTA 1256143
Query 65433 GAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTT 65492
|| || | || || || ||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct 1256142 CAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTT 1256083
Query 65493 CTTTGAGAAGCGAGTTGGGGACTA 65516
||| |||||||| |||| |||||
Sbjct 1256082 CTTCGAGAAGCGTGTTGCCGACTA 1256059
>seq2715
Length=1372167
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917
|||||| || |||||||| || ||||| || || | ||| ||||||||||| ||
Sbjct 303152 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 303211
Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977
|| |||||||| | ||| ||||| | || || |||| ||| || ||||| || ||
Sbjct 303212 ATGGTTGAAGAGCAGGACCTTGACCTGGCCGCGGTAATCGGCATCGATGACACCAGCGCC 303271
Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030
| ||| |||||| ||||||||| ||||| || |||| || ||||
Sbjct 303272 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 303324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596546139900480
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