Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002234195.1_
202017-07-27] 3,146 sequences; 56,132,059 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq380 147 4e-30
>seq380
Length=1607400
Score = 147 bits (162), Expect = 4e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| ||||| ||||| ||||||||||| ||||| || || || || |
Sbjct 982987 TACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGG 982928
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| ||| || || || ||||| || ||||| ||||| |||| |||||||| ||||
Sbjct 982927 AAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAG 982868
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||| || || ||| ||||| || ||||| ||||| ||||| | ||
Sbjct 982867 GAATACCCTCCTTGTCCTGGATC-TTGCTCTTCACATTATCAATGGTATCGGATGACTCG 982809
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||| ||| || ||||| || || | ||||| || || || |||||
Sbjct 982808 ACTTCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 982759
Score = 125 bits (138), Expect = 1e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || |||||||| ||||| || || || || | || ||| |||||||| |||||
Sbjct 982733 TGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCGAGTTGC 982674
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|||||||||||||| || | || || || ||||| || || ||||||||||||||||||
Sbjct 982673 TTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGAATCTTT 982614
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
| || ||||| || || ||||| | || || || | ||| || |||||||| ||
Sbjct 982613 GACTTAACATTGTCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTG 982554
Query 82788 AACGTCTTTACAAATAT 82804
| ||||| || | |||
Sbjct 982553 AGGGTCTTGACGACTAT 982537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981787624386494
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |