Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq822 201 1e-46
>seq822
Length=1165972
Score = 201 bits (222), Expect = 1e-46
Identities = 625/958 (65%), Gaps = 16/958 (2%)
Strand=Plus/Minus
Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769
||| || || || || || || ||||| | || | ||| | || || ||||||||
Sbjct 797368 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCAATAATTTCAGTGCA 797309
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
|| ||| || |||||| || | || | ||| || ||||| |||||| |||||
Sbjct 797308 CAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATC 797249
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||| || || ||||| || | ||||| ||| |||| | || | ||| || | ||| |
Sbjct 797248 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAG 797189
Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGT--GTATAC 53944
||||||| || || ||| | ||| | ||| |||||| | ||| |
Sbjct 797188 CTTCTGAGCCTTGAT---AGTCTTGCGACCCTTGCCCTCCTTCTCGTATTTTTCGTAAAG 797132
Query 53945 AATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 54004
| | || ||||| || || | | | | | ||||| || || | || ||||||
Sbjct 797131 AGCC--TCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATC 797074
Query 54005 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 54064
| | ||| || |||| | | || || |||||||| |||||||| |||||||| ||
Sbjct 797073 AGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCG 797014
Query 54065 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 54124
| || || || | || | ||||| || || |||||| ||||| |||||
Sbjct 797013 AGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAT 796954
Query 54125 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTT 54184
| | | |||||| ||||| || || | ||| |||| | | | || || || |||||
Sbjct 796953 TCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTG 796894
Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244
|| |||||||| | || | ||| ||||| || | || | | ||| |||| || ||
Sbjct 796893 CCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACGCCG 796834
Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTG 54302
||||||| ||| ||||| |||| ||| ||| ||| | ||||||||| | | ||
Sbjct 796833 TTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAATACGGTGCACGTTC 796774
Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362
| |||| || || || ||||| || ||||| | || || || | ||||| ||||
Sbjct 796773 A--GACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGA 796716
Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422
||||||| ||||| || ||| |||| | | | || || |||| |||| | ||
Sbjct 796715 TGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGATGACAATTGGGGCTGAG 796656
Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 54482
|| || || || || | || ||||| || || ||||| |||| || | || |
Sbjct 796655 GGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATCAGGT 796596
Query 54483 TGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATT 54541
|||| ||||| | || || ||||| || | || || || | ||||||||
Sbjct 796595 TGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAG-ATACCAACAGACACACGCATG 796537
Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601
| ||| |||||||| | || || ||||| || || || || | ||||||| |||
Sbjct 796536 ATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTAGGATCGCTCC 796477
Query 54602 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659
||||| || || ||||| || | |||| || || || || || | ||| | ||||
Sbjct 796476 AAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCGGAGT 796419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593709495500880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |