Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1070 82.4 9e-11
>seq1070
Length=1195525
Score = 82.4 bits (90), Expect = 9e-11
Identities = 184/273 (67%), Gaps = 4/273 (1%)
Strand=Plus/Plus
Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055
|||||||| || || || || |||||| ||||| | || || ||| |||| || |||
Sbjct 835337 AGCTGGTCTACACCTTGACCTGTGTAATCCGTCTTTGCATCAACATACTCGGCGCCAAAG 835396
Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115
|| | ||| ||||| || || ||||| || || || || ||| | || || |||
Sbjct 835397 TGTCGCCATTGGAAGCCATATACGGGGCCGAGATCGCCAACCTCACGATGATTGAGGCCG 835456
Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173
| |||| || || || || || ||| | ||||||||||||| ||| | |||| |
Sbjct 835457 AGGTTGTCGAGAAATTCGCGAGAGCCATTGCCATCCCAGATCTTGATGCCAGCTTCGCTG 835516
Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233
|| ||| ||| || ||| || ||||||||| | ||||| | | ||| | |
Sbjct 835517 AG-GCT-ATTAGAAGAAGTGTTGCCTTCGATGAACCACAAGAGCTCGGCAATGACTGCTC 835574
Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|||||| | |||||| || || || ||||
Sbjct 835575 GGGTGAAGACACGCTTGGTAGTAAGGAGAGGGA 835607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590064769809240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |