Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1070 82.4 9e-11 >seq1070 Length=1195525 Score = 82.4 bits (90), Expect = 9e-11 Identities = 184/273 (67%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| || || || || |||||| ||||| | || || ||| |||| || ||| Sbjct 835337 AGCTGGTCTACACCTTGACCTGTGTAATCCGTCTTTGCATCAACATACTCGGCGCCAAAG 835396 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 || | ||| ||||| || || ||||| || || || || ||| | || || ||| Sbjct 835397 TGTCGCCATTGGAAGCCATATACGGGGCCGAGATCGCCAACCTCACGATGATTGAGGCCG 835456 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173 | |||| || || || || || ||| | ||||||||||||| ||| | |||| | Sbjct 835457 AGGTTGTCGAGAAATTCGCGAGAGCCATTGCCATCCCAGATCTTGATGCCAGCTTCGCTG 835516 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 || ||| ||| || ||| || ||||||||| | ||||| | | ||| | | Sbjct 835517 AG-GCT-ATTAGAAGAAGTGTTGCCTTCGATGAACCACAAGAGCTCGGCAATGACTGCTC 835574 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | |||||| || || || |||| Sbjct 835575 GGGTGAAGACACGCTTGGTAGTAAGGAGAGGGA 835607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590064769809240