Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq486 86.0 9e-12
>seq486
Length=637844
Score = 86.0 bits (94), Expect = 9e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
|||||||| || ||||||||||| ||| | ||| |||| || ||||| || |||
Sbjct 83242 AAGACACTCACTGGCAAAACTATCACTCTCGAGGTTGAGTCATCCGATACCATCGACAAT 83183
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| || || || || || || || ||||| || |||||||| || | || || |||
Sbjct 83182 GTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGCCTGATCTTT 83123
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||| | ||||| | ||||| | | || || || ||||| || |||||
Sbjct 83122 GCTGGCAAGCAACTTGAGGACGGCCGAACCCTCGCCGACTACAACATTCAGAAGGAATCT 83063
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| | ||| | || | || | || ||||||||
Sbjct 83062 ACCCTTCATCTCGTCCTCCGCCTCCGTGGTGGTAT 83028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755440598140800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |