Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq822 208 1e-48
>seq822
Length=1165972
Score = 208 bits (230), Expect = 1e-48
Identities = 629/959 (66%), Gaps = 18/959 (2%)
Strand=Plus/Minus
Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800
||| || || || || || || ||||| | || | ||| | || || ||||||||
Sbjct 797368 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCAATAATTTCAGTGCA 797309
Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860
|| ||| || |||||| || | || | ||| || ||||| |||||| |||||
Sbjct 797308 CAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATC 797249
Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920
||| || || ||||| || | ||||| ||| |||||| || | ||| || | ||| |
Sbjct 797248 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAA- 797190
Query 65921 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGT--GTATA 65974
| || ||||||| || || ||| | ||| | ||| |||||| | ||| |
Sbjct 797189 GCTTCTGAGCCTTGAT---AGTCTTGCGACCCTTGCCCTCCTTCTCGTATTTTTCGTAAA 797133
Query 65975 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 66034
| | |||||||| || || | | | | | ||||| || || | || |||||
Sbjct 797132 GAGCC--TCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACAT 797075
Query 66035 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 66094
|| | ||| || |||| | | || || |||||||| |||||||| |||||||| ||
Sbjct 797074 CAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGC 797015
Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154
| || | || | || | ||||| || || |||||| ||||| |||||
Sbjct 797014 GAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 796955
Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214
| | | |||| | ||||| || || | ||| ||||| | | | || || || |||||
Sbjct 796954 TTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTT 796895
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
|| |||||||| | || | ||| ||||| || | || | | ||| |||| || ||
Sbjct 796894 GCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACGCC 796835
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATA--TTACTAATT 66332
||||||||||| ||||| |||| ||| ||| ||| | ||||||||| | | ||
Sbjct 796834 GTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAATACGGTGCACGTT 796775
Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392
||||| || || || ||||| || ||||| | || || || | ||||| |||
Sbjct 796774 --CAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAG 796717
Query 66393 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 66452
|||||||| ||||| || ||| |||| | | | || || |||| |||| | ||
Sbjct 796716 ATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGATGACAATTGGGGCTGA 796657
Query 66453 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512
|| || || || || | || ||||| || || ||||| |||| || | ||
Sbjct 796656 GGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATCAGG 796597
Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCAT 66571
||||| ||||| | || || ||||| || | || || || | ||||||||
Sbjct 796596 TTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAG-ATACCAACAGACACACGCAT 796538
Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 66631
| ||| |||||||| | || || ||||| || || || | | ||||||| ||
Sbjct 796537 GATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTAGGATCGCTC 796478
Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690
|||||| || || ||||| || | |||| || || || || || | ||| | ||||
Sbjct 796477 CAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCGGAGT 796419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658159381502040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |