Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq822 343 4e-89
>seq822
Length=1165972
Score = 343 bits (380), Expect = 4e-89
Identities = 1113/1692 (66%), Gaps = 62/1692 (4%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458
||||| ||||| ||||||||| ||| || | ||| | ||||| || || || ||
Sbjct 796469 AAGACTTTGGAGCGATCCTACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGGCCTCA 796527
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516
||||||| | |||||||| || |||||||| || || || ||| || ||| |
Sbjct 796528 GCATATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGACGATATCGAGCGAGT 796581
Query 363517 ----GAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACGCCAACAAT 363569
|| ||||| || || | || | | |||| || || ||| | || ||| |
Sbjct 796582 CTTGGAGACATACAACCTGAT--GTCCA-GCAAATTCTTTACACATGCCTCTCCCACACT 796638
Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629
| ||| ||||| || | | | || || |||| |||||||| | | | ||||||||
Sbjct 796639 CTTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGATATGAAGGA 796698
Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689
||| || ||||| |||| || || || |||| ||||| | || ||||||| ||
Sbjct 796699 CGACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 796758
Query 363690 AGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747
|| || |||||| | | || | ||| | ||||||| || | | ||||| |||
Sbjct 796759 TGGAGGTATTGGTCTGAACG-TGCACCGTATTCGTGCTACTGG-CTCCTACATCGCCGGT 796816
Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| || ||| || || || | ||||| ||||||||||| || |||| ||||| |
Sbjct 796817 ACCAACGG-TACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 796875
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
|| ||||| |||||||| ||||| || || ||||| || || |||||||||
Sbjct 796876 CTATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 796935
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| | ||| | || || || ||||| ||||| || ||| || || ||||| | ||
Sbjct 796936 GCACTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCG 796995
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
||| ||||| |||||| || |||||| | |||| | |||||||||||| || ||
Sbjct 796996 TGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA--A 797053
Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | | | | ||| |||| | ||||| |||| || || || || |||| |
Sbjct 797054 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 797113
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
||||| || | | ||||| |||||||| || || |||||| |||| ||| |||||
Sbjct 797114 GGTGAGGAGTTCGAGGCTCTTTACGAAAAATACGAGAAGGAGGGCAAGGGTCGCAAGACT 797173
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || |||||||| |||| |||||| | || | |||| |||||| |||| ||||
Sbjct 797174 ATCAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAA-ACCC 797232
Query 364165 TAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
| | ||| | ||||| ||| | || ||||||||| |||||| || |||| || || |
Sbjct 797233 TTTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGCACCA- 797291
Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| | || | ||||| || || || |||||||| || || || |||||| || |
Sbjct 797292 TCCGAAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCCTGACGAGGTCGCTG 797351
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATG-GTACT--TTTG 364336
| || |||||||| || | || || || | || | | | |||| | || | |
Sbjct 797352 TCTGCAACCTTGCCTCTCTAGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGCTACG 797411
Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
|| | || | | | || || | | || || | |||| || ||||| | ||||
Sbjct 797412 ACTTCAAGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCG 797471
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCC 364451
|| ||| | || || | || || || || ||| || ||||| || || ||
Sbjct 797472 ACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGC-----AACATGCGCCACCGACC 797526
Query 364452 GATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTT 364509
|||||||| ||||| |||||||| ||||| | ||| | ||||| ||| | ||
Sbjct 797527 CATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCCTTC 797584
Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569
|| || || || ||||||| || || ||| ||||||| || || || || || ||
Sbjct 797585 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCC 797644
Query 364570 ATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTC 364628
| |||| || |||| | |||| || |||| ||||| || | |||| ||
Sbjct 797645 CTCACTGCCTCCGTG-CAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 797703
Query 364629 CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATG 364688
|| || |||| | ||||||| || | ||||| |||| ||| |||| || ||
Sbjct 797704 TCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTG 797763
Query 364689 GAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGT 364745
| ||||||| || || || | || |||| || |||| || ||| || ||| |
Sbjct 797764 GGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGTATCCGTAACAGTCTGCTCCT 797823
Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805
| || || ||||| || || ||| | ||||| || || |||||||||||||||||
Sbjct 797824 T---GCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCGA 797880
Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865
|| | || ||| | || || || || || | || || || | ||| || ||
Sbjct 797881 GCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAA 797940
Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925
| | ||||||| ||| |||| || |||||| || |||||||||
Sbjct 797941 CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCG 798000
Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985
||||| || | |||||||| | ||||||||||| | || | ||| | ||| |
Sbjct 798001 CATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCTGATGTCAAGGC 798060
Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045
| | || || || || ||||| ||||| ||| || || | ||||| || || ||
Sbjct 798061 TCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGACCG 798120
Query 365046 CGGTGCTTTTAT 365057
||||| || ||
Sbjct 798121 AGGTGCCTTCAT 798132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303326363575442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |