Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq822 343 4e-89 >seq822 Length=1165972 Score = 343 bits (380), Expect = 4e-89 Identities = 1113/1692 (66%), Gaps = 62/1692 (4%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||||||||| ||| || | ||| | ||||| || || || || Sbjct 796469 AAGACTTTGGAGCGATCCTACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGGCCTCA 796527 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||||||| | |||||||| || |||||||| || || || ||| || ||| | Sbjct 796528 GCATATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGACGATATCGAGCGAGT 796581 Query 363517 ----GAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACGCCAACAAT 363569 || ||||| || || | || | | |||| || || ||| | || ||| | Sbjct 796582 CTTGGAGACATACAACCTGAT--GTCCA-GCAAATTCTTTACACATGCCTCTCCCACACT 796638 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | ||| ||||| || | | | || || |||| |||||||| | | | |||||||| Sbjct 796639 CTTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGATATGAAGGA 796698 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 ||| || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 796699 CGACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 796758 Query 363690 AGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 || || |||||| | | || | ||| | ||||||| || | | ||||| ||| Sbjct 796759 TGGAGGTATTGGTCTGAACG-TGCACCGTATTCGTGCTACTGG-CTCCTACATCGCCGGT 796816 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| || || || | ||||| ||||||||||| || |||| ||||| | Sbjct 796817 ACCAACGG-TACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 796875 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || ||||| |||||||| ||||| || || ||||| || || ||||||||| Sbjct 796876 CTATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 796935 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || || || ||||| ||||| || ||| || || ||||| | || Sbjct 796936 GCACTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCG 796995 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| ||||| |||||| || |||||| | |||| | |||||||||||| || || Sbjct 796996 TGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA--A 797053 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| |||| | ||||| |||| || || || || |||| | Sbjct 797054 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 797113 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 ||||| || | | ||||| |||||||| || || |||||| |||| ||| ||||| Sbjct 797114 GGTGAGGAGTTCGAGGCTCTTTACGAAAAATACGAGAAGGAGGGCAAGGGTCGCAAGACT 797173 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || |||||||| |||| |||||| | || | |||| |||||| |||| |||| Sbjct 797174 ATCAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAA-ACCC 797232 Query 364165 TAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 | | ||| | ||||| ||| | || ||||||||| |||||| || |||| || || | Sbjct 797233 TTTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGCACCA- 797291 Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || | || | ||||| || || || |||||||| || || || |||||| || | Sbjct 797292 TCCGAAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCCTGACGAGGTCGCTG 797351 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATG-GTACT--TTTG 364336 | || |||||||| || | || || || | || | | | |||| | || | | Sbjct 797352 TCTGCAACCTTGCCTCTCTAGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGCTACG 797411 Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 || | || | | | || || | | || || | |||| || ||||| | |||| Sbjct 797412 ACTTCAAGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCG 797471 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCC 364451 || ||| | || || | || || || || ||| || ||||| || || || Sbjct 797472 ACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGC-----AACATGCGCCACCGACC 797526 Query 364452 GATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTT 364509 |||||||| ||||| |||||||| ||||| | ||| | ||||| ||| | || Sbjct 797527 CATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCCTTC 797584 Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 || || || || ||||||| || || ||| ||||||| || || || || || || Sbjct 797585 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCC 797644 Query 364570 ATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTC 364628 | |||| || |||| | |||| || |||| ||||| || | |||| || Sbjct 797645 CTCACTGCCTCCGTG-CAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 797703 Query 364629 CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATG 364688 || || |||| | ||||||| || | ||||| |||| ||| |||| || || Sbjct 797704 TCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTG 797763 Query 364689 GAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGT 364745 | ||||||| || || || | || |||| || |||| || ||| || ||| | Sbjct 797764 GGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGTATCCGTAACAGTCTGCTCCT 797823 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 | || || ||||| || || ||| | ||||| || || ||||||||||||||||| Sbjct 797824 T---GCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCGA 797880 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 || | || ||| | || || || || || | || || || | ||| || || Sbjct 797881 GCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAA 797940 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | | ||||||| ||| |||| || |||||| || ||||||||| Sbjct 797941 CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCG 798000 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985 ||||| || | |||||||| | ||||||||||| | || | ||| | ||| | Sbjct 798001 CATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCTGATGTCAAGGC 798060 Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 | | || || || || ||||| ||||| ||| || || | ||||| || || || Sbjct 798061 TCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGACCG 798120 Query 365046 CGGTGCTTTTAT 365057 ||||| || || Sbjct 798121 AGGTGCCTTCAT 798132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303326363575442