Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq486 98.7 9e-16 seq1259 86.0 5e-12 >seq486 Length=637844 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | ||||| | ||||||||| | | Sbjct 83029 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 82970 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || |||||| ||||| || || || |||||||||||| Sbjct 82969 GATACCATTGATAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCCGATCAA 82910 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | || ||||||||||| || || | | ||| | ||| || ||| Sbjct 82909 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACAAC 82850 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || |||||||| Sbjct 82849 ATCCAGAAGGAATCTAC 82833 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 24003 GTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAG 24062 || || ||| | ||||| ||| | || || |||| || ||| | ||| |||||||| Sbjct 83245 GTCAAGACACTCACTGGCAAAACTATCACTCTCGAGGTTGAGTCATCCGATACCATCGAC 83186 Query 24063 CAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATT 24122 | ||||| |||||| ||||| || || || ||||| ||||| ||| | ||||| Sbjct 83185 AATGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGCCTGATC 83126 Query 24123 TACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAA 24182 | | ||||||||||| || || | | ||| | || ||| || |||||||| || ||| Sbjct 83125 TTTGCTGGCAAGCAACTTGAGGACGGCCGAACCCTCGCCGACTACAACATTCAGAAGGAA 83066 Query 24183 TCTACAATTCAT 24194 ||||| ||||| Sbjct 83065 TCTACCCTTCAT 83054 >seq1259 Length=620669 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| || ||||||||||| | ||||| ||||| ||| Sbjct 152515 ATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 152456 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || || |||||| ||||||| | || || ||||| ||||||||| Sbjct 152455 AAGGAGGGCATTCCCCCGGACCAACAGCGACTGATCTTCGCTGGTAAGCAGCTCGAAGAT 152396 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| || ||| || ||||| || || Sbjct 152395 GGCCGAACTCTCTCCGACTACAACATCCAGAA 152364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927453812805