Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1496 122 8e-23
seq486 118 1e-21
seq1030 98.7 9e-16
>seq1496
Length=1355525
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| ||||||
Sbjct 510734 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 510675
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| | ||||||||||| || |||
Sbjct 510674 AGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 510615
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 510614 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 510555
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 510554 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 510508
>seq486
Length=637844
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | || || || | || | || |||||||| || |||||||| |||||
Sbjct 82574 GCCGCCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCT 82633
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| || || |||||||| || ||| |||| | ||| ||||| || || ||
Sbjct 82634 CAGGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGGGG 82693
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || || ||| | | || | ||| || |||||||||
Sbjct 82694 GATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGACTCGAC 82753
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || ||||| ||||| || ||||||||||||||
Sbjct 82754 CTCAAGGGTGATCGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 82801
Score = 111 bits (122), Expect = 1e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| |||||||||||||| | |||||| |||||| ||||| |||||
Sbjct 83343 GTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCAAGCTGTTTGCCG 83402
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || ||||| ||||| || || ||||| || || ||||| || || ||||
Sbjct 83403 GCGAAAATCAAACGTTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 83462
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||| |||| ||||| | |||| || | ||| || ||||| | ||
Sbjct 83463 ACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTGCCGGTCAAGGTC 83522
Query 131218 TTTACGAAAATCTGCATGA 131236
|| ||||| ||||||||||
Sbjct 83523 TTGACGAAGATCTGCATGA 83541
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | ||| || ||||| ||||||||||| |||
Sbjct 83031 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCG 83090
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| || |||||||| || |||| | |||||||| || ||||||
Sbjct 83091 AGGGTTCGGCCGTCCTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGG 83150
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||||||| ||||| |
Sbjct 83151 ATACCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGGATGACTCAACC 83210
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| || | ||||| || || || || || ||||
Sbjct 83211 TCGAGAGTGATAGTTTTGCCAGTGAGTGTCTTGACGA 83247
>seq1030
Length=250146
Score = 98.7 bits (108), Expect = 9e-16
Identities = 337/515 (65%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAAC-AGCAGCACCGC 46142
|| || ||| | || ||||| |||||||||| || |||||| | | || || |
Sbjct 123695 ATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 123754
Query 46143 GACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAG 46202
|||| ||| ||||| | || ||||| || ||| ||||| |||| || ||
Sbjct 123755 TCCTTT-GCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 123813
Query 46203 TTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261
|||||| | ||||| | |||| || | || | |||||||||||||||| || ||
Sbjct 123814 CTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTC-TCATGCCCGGCCTGACCTTCTCCA 123872
Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321
||||||| || || || || ||||| || || || |||||||| || ||| || ||
Sbjct 123873 ACGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCCTGCCTC--CT-CCACT 123929
Query 46322 CTCGCGTGCA-CGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTG 46380
||| | | | | | || || | | | | | | ||| ||| || || ||
Sbjct 123930 CTCACCTTAAGGGTCGTGCCAGCAAGC-AGATGATCCAGGACATCATCACTGATGCCGTC 123988
Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCA 46440
|||||||| ||||||| | || | || || ||| |||||| || |||||||| |
Sbjct 123989 ACCATTGAGCAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAATTCT 124048
Query 46441 CAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAG 46500
| ||| | || || ||||| || || || || || ||||| ||| | |
Sbjct 124049 GACCTCATGAAGCAGTATATTGAGTTCGTCGCCGATCGTCTCCTCGTCGCTCTTGGCAAC 124108
Query 46501 CCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560
|||| | | || |||| || ||||| || ||| | ||||||||||| | |||
Sbjct 124109 GAGAAGGTCTACAAGGCTAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTTGGTGGC 124168
Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || ||||| ||||| || | ||| ||
Sbjct 124169 AAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 124203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472003176839040
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