Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq486 95.1 1e-14
>seq486
Length=637844
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||| || ||||||| |||| || ||||| ||
Sbjct 83539 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTTGAGTCTTCC 83480
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| | ||| | || | ||| ||||| || || || || || || ||
Sbjct 83479 GACACTATCGACAACGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATCCCCCCCGATCA 83421
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| || | ||||| ||||||||||| | || || | ||||| | ||||||||
Sbjct 83420 GCAACGTTTGATTTTCGCCGGCAAACAGCTTGAGGACGGCCGCACCCTCTCTGATTACAA 83361
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| || || || || || ||
Sbjct 83360 CATTCAGAAGGAGTCTACTCTTCA 83337
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | ||||| || | ||||| | || || ||||| |
Sbjct 82801 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACGATCACCCTTGAGGTCGAGTCCAGT 82742
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| ||||| || || ||||| || || || || ||||| ||
Sbjct 82741 GACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 82682
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || |||| || || || || || | ||||||| |||||| || |||| |||||
Sbjct 82681 CAACGTCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTGAGCGACTACAAC 82622
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || || || || || ||
Sbjct 82621 ATCCAGAAGGAGTCAACTCTCCA 82599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433319386387265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |