Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1030 190 2e-43 seq822 187 3e-42 >seq1030 Length=250146 Score = 190 bits (210), Expect = 2e-43 Identities = 540/818 (66%), Gaps = 25/818 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 124204 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 124145 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || ||||| ||||| | | || | | | |||| |||| |||| Sbjct 124144 GAAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACGAGG 124090 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| ||||||| |||| ||| ||||| ||||| |||| ||| Sbjct 124089 AGACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGG 124030 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| ||||| || || || |||| ||| |||||| ||||| || | |||| Sbjct 124029 GCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATG 123970 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | || || | | | | || | | || | || | || ||| || |||| Sbjct 123969 TCCTGGATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCA 123913 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || |||||||||||| ||||| |||||||| || || |||||| ||| || ||| Sbjct 123912 AAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGC 123853 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | |||||| || | ||| | ||| ||||||||| ||| Sbjct 123852 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCC 123793 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCA 126228 || ||| ||||| |||| |||||||| ||||||||| | | | || | | | ||| Sbjct 123792 TCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCA 123734 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 || ||||| | ||||| || ||| || || | ||||| || || | ||||| Sbjct 123733 TCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAG 123674 Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348 | | | | || || |||||||| | || ||||| || || || ||| Sbjct 123673 GTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGGTCTCGGA 123614 Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407 |||| | | ||| || | ||| | ||||||| | || || ||| ||||| | Sbjct 123613 ATGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGA 123555 Query 126408 CCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 126466 |||| | | ||| | | | || ||||| ||||| ||||| || |||| || Sbjct 123554 CCTC-GCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 123496 Query 126467 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCG 126523 || || ||||| | | ||| ||| |||| | ||||| | ||||||||| Sbjct 123495 AAGGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGATTGTTCCAGTCG 123436 Query 126524 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | |||||||| |||||||| | |||||| |||||||| Sbjct 123435 TGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 123398 >seq822 Length=1165972 Score = 187 bits (206), Expect = 3e-42 Identities = 1094/1724 (63%), Gaps = 53/1724 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 798278 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTCTTGAGAC 798219 Query 113625 CCTGCTTCCAGGCATACATA-TGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 | | |||||| | | || | ||||| || | |||| | || || | |||| Sbjct 798218 CAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTCCTTCATG 798160 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| ||||| || || |||||| || || || || ||||| | || Sbjct 798159 TGGATGTTCAGTGACTGGGACTGGTCAATGAAGGCACCTCGGTCAGCGGCCATCTGAACG 798100 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || | | || ||||| ||||| | || || ||| | |||| | ||||| Sbjct 798099 ACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCAGCAGGGATG 798040 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 798039 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 797980 Query 113864 CAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTC 113919 || ||||| || | || |||| | || || | |||||||| ||||| Sbjct 797979 CACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTC 797924 Query 113920 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 ||| |||||| |||| | | ||||| |||| ||||| ||||| |||||||| ||||| Sbjct 797923 ACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTT 797864 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 |||| || || | ||| ||| || ||||| || || | ||| || |||||||||| Sbjct 797863 GCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGAT 797804 Query 114040 ACCCTTTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 114097 ||| | | | | | | | | || || | | |||||||| || | | || Sbjct 797803 ACCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTG 797746 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 | | |||||| || |||||||||||||| | ||||| || || |||| || || | Sbjct 797745 ACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAG 797686 Query 114158 TATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214 || || ||||| ||| |||| | ||||| || |||||| ||||| || || Sbjct 797685 TAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGGTAGATG 797629 Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 114274 ||||| || || | || | | |||||| || || || | | || || Sbjct 797628 GTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAG 797570 Query 114275 AA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 | || || |||| || || || || |||||||| ||||| || || || | ||| || Sbjct 797569 AGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTGGCGCATGTT 797510 Query 114334 AGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 || ||||| |||| || || || ||| ||||| | | | || || || Sbjct 797509 GCTGTTGCGAGC---CTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTTGTTCAGGTT 797453 Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCTT 114449 | ||||||| ||| || || | ||| | | | || | | | | || || | Sbjct 797452 GCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGAAGTCGTAGCAG-GCCTCATCGT 797394 Query 114450 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 114509 |||| | ||| || || | || || || || || |||| | ||| || Sbjct 797393 AGTTGATGAAGGAAGGCAGAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGG 797334 Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 || ||||| |||||||| || |||| || ||||| |||||||| | |||||||| Sbjct 797333 CACAATACTCAATAATTTCAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTT 797274 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 | || ||| |||||| ||||||||||| |||||| | || | || ||||| || | Sbjct 797273 GGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCT 797214 Query 114630 GGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCC 114686 | | || ||||| || | ||| | | || | | || | | || | ||| || | | Sbjct 797213 GAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTG-ATAGTCTTGCG-ACCCTTG-C 797157 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 |||||| |||||| ||| ||| || || || ||||| ||||| | || | ||| | Sbjct 797156 CCTCCTTCTCGTATTTTTCGTAAAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGC 797097 Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806 | || || | ||||| | || | ||| | ||| || |||||||||||||| | Sbjct 797096 CAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAA 797037 Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 | || || |||||||| || || ||| || || || || | || || | || | Sbjct 797036 AAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGT 796977 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926 | || || | || | || || | || ||| | |||||| || || ||||| | | Sbjct 796976 GGTTCTTTCGGAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGG 796917 Query 114927 CGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 | | | || | ||| | | ||| |||| | ||||| | || ||| || | Sbjct 796916 CAAAAGCACCGGGTCGCTT--GTTG-CCACCCTGATCGACATAGCGAGCAGTGTTGTTGA 796860 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGA 115038 | || |||||||| |||| | || | ||| || || || || ||| || ||| Sbjct 796859 AGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGC 796800 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 | | | || | | | || | || || ||||||||| || ||| ||| ||||| Sbjct 796799 C--AGTAGCACGAATACGGTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCAT 796742 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158 || || | ||||| | ||||||| || || || ||| |||| | ||| | Sbjct 796741 GGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAA 796682 Query 115159 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 |||||| |||| ||| ||| || ||||||||||||||||| || || | || || Sbjct 796681 GAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATG 796622 Query 115219 GATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 || | | | ||| ||||||| | ||| ||||||||||| Sbjct 796621 --TGTAAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGAC 796580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597341421453480