Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq486 107 2e-18
>seq486
Length=637844
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || |||||||||||||| | || |||||| ||||
Sbjct 83328 AGAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCC 83387
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| |||||||| |||| | || ||||| ||||| || || || || || ||
Sbjct 83388 TCAAGCTGTTTGCCGGCGAAAATCAAACGTTGCTGATCGGGGGGGATGCCCTCCTTGTCC 83447
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | || || || | ||| | ||||
Sbjct 83448 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTC 83507
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||||| || || ||||| || |||||
Sbjct 83508 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 83539
Score = 100 bits (110), Expect = 3e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||||| || ||||| || ||||||||||| || |||| ||| || ||||
Sbjct 83046 AGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCGTCC 83105
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| |||||||| ||| | || || |||||||| || ||||| || || || || ||
Sbjct 83106 TCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATACCCTCCTTGTCC 83165
Query 64352 TGTATTTTTTGCTTTACA 64369
|| || ||| ||| |||
Sbjct 83166 TGGATCTTTGACTTGACA 83183
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || |||||||| || | | || || |||| ||||| ||||||||
Sbjct 82833 GTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCAAGTTGCTTGCCA 82892
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| ||||| || ||||||||||| || || || ||||| || || |||
Sbjct 82893 GCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGAATCTTGCTCTTC 82952
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | ||||| | || ||||| | ||| | |||||| || || | ||
Sbjct 82953 ACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTGAGGGTC 83012
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| ||||||||
Sbjct 83013 TTGACGAAGATTTGCAT 83029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499634613491640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |