Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq486 107 2e-18 >seq486 Length=637844 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || |||||||||||||| | || |||||| |||| Sbjct 83328 AGAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCC 83387 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| |||||||| |||| | || ||||| ||||| || || || || || || Sbjct 83388 TCAAGCTGTTTGCCGGCGAAAATCAAACGTTGCTGATCGGGGGGGATGCCCTCCTTGTCC 83447 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | ||| | |||| Sbjct 83448 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTC 83507 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||||| || || ||||| || ||||| Sbjct 83508 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 83539 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || ||||||||||| || |||| ||| || |||| Sbjct 83046 AGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCGTCC 83105 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| |||||||| ||| | || || |||||||| || ||||| || || || || || Sbjct 83106 TCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATACCCTCCTTGTCC 83165 Query 64352 TGTATTTTTTGCTTTACA 64369 || || ||| ||| ||| Sbjct 83166 TGGATCTTTGACTTGACA 83183 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | | || || |||| ||||| |||||||| Sbjct 82833 GTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCAAGTTGCTTGCCA 82892 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||| || ||||||||||| || || || ||||| || || ||| Sbjct 82893 GCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTTGAATCTTGCTCTTC 82952 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || ||||| | ||| | |||||| || || | || Sbjct 82953 ACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTGAGGGTC 83012 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 83013 TTGACGAAGATTTGCAT 83029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634613491640