Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq822 241 1e-58 >seq822 Length=1165972 Score = 241 bits (266), Expect = 1e-58 Identities = 1072/1678 (64%), Gaps = 56/1678 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 796451 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCCTACCTCCTCAAGATTGACGGTAAG 796510 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || |||| Sbjct 796511 ATTGTCGAGCGGCCTCAGCATATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGACGAT 796570 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | || ||| ||| | ||| |||| || | Sbjct 796571 ATCGAGCGAGTCTTGGAGACATACAACCTGATGTCCAGCAAATTCTTTACACATG-CCTC 796629 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || || || |||||||| || ||||| ||| || |||| || || ||| || | Sbjct 796630 TCCCACACTCTTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGA 796689 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || || || | ||| | |||||| |||||| | ||||| Sbjct 796690 TATGAAGGACGACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTC 796749 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | || ||| |||| ||||| | || |||||| Sbjct 796750 CAAGATGGCTGGAGGTATTGGTCTGAACGTGCAC--CGTATTCGTGCTACTGGCTCCTAC 796807 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || ||||||||| | || |||||||| || |||||||||||| Sbjct 796808 ATCGCCGGTACCAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAAC 796867 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || ||||| || || |||||||| | | | ||| |||| || |||| ||| Sbjct 796868 ACTGCTCGCTATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 796927 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | ||| | || || |||||||||||||| || || Sbjct 796928 GAGCCTTGGCACTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAG 796987 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||||| ||| ||| || ||| | || || ||||||||||| || Sbjct 796988 GAGGTCCGTGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGT 797047 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| | ||||| || | || ||||| || || || || || ||||| Sbjct 797048 GTTGAAAAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGAC 797107 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAA---------TCGCAGGGC 94425 || || ||| || || | |||| ||||||| | ||||| Sbjct 797108 -----TGCTACG----GTGAGGAGTTCGAGGCTCTTTACGAAAAATACGAGAAGGAGGGC 797158 Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTG 94485 |||| | ||| ||| | ||| |||||| ||| || || | || | ||| Sbjct 797159 AAGGGTCGCAAGACTATCAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACT 797218 Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCA 94544 ||||| || | || | ||| | | |||||| |||| ||| |||| |||||| | Sbjct 797219 GAGACTGGAAACCCTTTCATGCTCTACAAGGATGCCTGT-AACCGCAAGAGCAACCAAAA 797277 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | ||||||| ||| || || || |||||||| || ||| | |||||| | | || Sbjct 797278 GAACCTCGGCACCATCCGAAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCC 797337 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGC 94664 |||||| | ||||| || ||||| | ||| || | || | | ||| | | || Sbjct 797338 TGACGAGGTCGCTGTCTGCAACCTTGCCTC--TCTAGCTCTGC-CTTCCTT----CAT-- 797388 Query 94665 CTAC-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATG 94722 | || ||| | || | | ||| | || || || || | | | ||| || Sbjct 797389 CAACTACG-ATGAGGCCTGCTACGACTTCAAGAAG---TTGCACGAGGTCAGTCAGGTTG 797444 Query 94723 GTCTT--GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 | || |||||||||| | | |||||| |||| |||||| ||||||||||| | Sbjct 797445 TTATTCGCAACCTGAACAAGATCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCA 797504 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 || ||| || || || ||||| || |||| || ||||| | || || || | Sbjct 797505 ACAGCAACATGCGCCACCGACCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCC 797564 Query 94841 TGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCG 94900 | |||| |||||| ||| || ||| || | | || | | || |||| Sbjct 797565 TTGCTCTGCGCATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCG 797624 Query 94901 AAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960 | | ||| || ||| ||| | | ||||| || |||||| ||| | || | Sbjct 797625 AGACCATCTACCACGCTGCCCTCACTGCCTCCGTGCAGCTGGCCA---AGGAGGAGGGTC 797681 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 | || | ||| || || ||| |||| || | ||||||||| | ||| Sbjct 797682 CCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGA 797741 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACG 95080 || |||||||| | || | |||||||| |||| || | || || | | ||||| Sbjct 797742 ACGTCAAGCCCTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACG 797801 Query 95081 GTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTG 95140 || | ||| ||||| | || || ||||| || ||| || | ||||| || | Sbjct 797802 GTATCCGTAACAGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGG 797861 Query 95141 GCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCG 95200 |||||||||||| ||||| |||| |||||||||| | ||| | | || || ||||| | Sbjct 797862 GCAACAACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTG 797921 Query 95201 GGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGG 95259 | || |||| || ||||| | || ||||| || || | ||||| ||||| Sbjct 797922 GTGAGTTCCAGGTTGTCAACCCCTGGTTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGG 797980 Query 95260 GGTGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCC 95315 || | ||||||| | |||| | || || ||| | |||||||| || Sbjct 797981 TCCGATGCTATGAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCC 798036 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || || | || ||||||| || || ||||| || |||||||| | |||||| Sbjct 798037 CAACATCCCTGCTGATGTCAAGGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGC 798094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494713113830760