Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1030 192 7e-44
seq822 158 1e-33
>seq1030
Length=250146
Score = 192 bits (212), Expect = 7e-44
Identities = 538/817 (66%), Gaps = 23/817 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| | || ||||||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 124204 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 124145
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| ||||| ||||| | | || | | | |||| |||| ||||
Sbjct 124144 GAAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACGAGG 124090
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
|||||||| | |||| ||||||| |||| ||| ||||| ||||| |||| |||
Sbjct 124089 AGACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGG 124030
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
||| ||||| || || || |||| ||| ||||||| || || || | ||||
Sbjct 124029 GCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATG 123970
Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522
| || || | | | | || | | || | || | || ||| || |||
Sbjct 123969 TCCTGGATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGTGGAGGAGG--CAG-GCA 123913
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || |||||||||||| ||||| |||||||| || || |||||| ||| || |||
Sbjct 123912 AAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGC 123853
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | |||||| || | ||| | || ||||||||| |||
Sbjct 123852 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCC 123793
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCAC 127702
|| ||| ||||| |||| ||||||| |||||||||| | ||| | | |||
Sbjct 123792 TCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCAT 123733
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGT 127762
|| ||||| | ||||| || ||| || || | ||||| || || | |||||
Sbjct 123732 CGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAGG 123673
Query 127763 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 127822
| | | | || || |||||||| | || ||||| || || || |||
Sbjct 123672 TAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGGTCTCGGAA 123613
Query 127823 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 127881
|||| | | ||| || | ||| | ||||||| | || || ||| ||||| ||
Sbjct 123612 TGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGAC 123554
Query 127882 CTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 127940
||| | | ||| | | | || ||||| ||||| ||||| || |||| || |
Sbjct 123553 CTC-GCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGA 123495
Query 127941 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCGT 127997
| || ||||| | | ||| ||| |||| | ||||| | ||||||||||
Sbjct 123494 AGGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGATTGTTCCAGTCGT 123435
Query 127998 CGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||||||| |||||||| | |||||| ||||||||
Sbjct 123434 GGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 123398
>seq822
Length=1165972
Score = 158 bits (174), Expect = 1e-33
Identities = 1092/1726 (63%), Gaps = 57/1726 (3%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
|||||||||| || || |||| || || ||||||||||| || |||||||| |
Sbjct 798278 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTCTTGAGAC 798219
Query 115586 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644
| | |||||| | | || | ||||| || | |||| | || || | ||||
Sbjct 798218 CAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTCCTTCATG 798160
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
|| ||||| ||||| || || |||||| || || || || ||||| | ||
Sbjct 798159 TGGATGTTCAGTGACTGGGACTGGTCAATGAAGGCACCTCGGTCAGCGGCCATCTGAACG 798100
Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
|| | | || ||||| ||||| | || || ||| | |||| | |||||
Sbjct 798099 ACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCAGCAGGGATG 798040
Query 115765 TCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTT 115821
| || || || || || ||| | || ||| || | | ||||||| | |
Sbjct 798039 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTCATAGCATCG 797983
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAACAAA 115877
||||| ||||| || | || |||| | || ||| | |||||||| ||
Sbjct 797982 GACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGG----TTGACAACCTGGAA 797927
Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937
|||||| |||||| |||| | | |||||||||| ||||| ||||| |||||||| ||
Sbjct 797926 CTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTT 797867
Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997
||| |||| || || | || ||| || ||||| || || | ||| || ||||| ||
Sbjct 797866 GTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACG 797807
Query 115998 GAGACCCACCCCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTC 116055
|| ||| | | | | | | || || | | |||||||| || | | |
Sbjct 797806 GATACCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGC 797749
Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115
| | | |||||| || |||||||||||||| | || || || || |||| || ||
Sbjct 797748 TTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTG 797689
Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172
|| || ||||| ||| |||| | ||||| || |||||| ||||| ||
Sbjct 797688 GAGTAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGGTAG 797632
Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
|| ||||| || || | || | | |||||| || || || | | ||
Sbjct 797631 ATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG- 797573
Query 116233 CACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291
|| | || || |||| || || || || |||||||| ||||| || || || | |||
Sbjct 797572 CAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTGGCGCAT 797513
Query 116292 ATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAG 116348
|| || ||||| |||| || || || ||| ||||| | | | || ||
Sbjct 797512 GTTGCTGTTGCGAGC---CTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTTGTTCAG 797456
Query 116349 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-T 116407
|| | ||||||| ||| || || | ||| | | | || | | | | || |
Sbjct 797455 GTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGAAGTCGTAGCAG-GCCTCAT 797397
Query 116408 CTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467
| | |||| | ||| || || | || || || || || |||| | ||| ||
Sbjct 797396 CGTAGTTGATGAAGGAAGGCAGAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAG 797337
Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527
|| ||||| |||||||| || |||| || ||||| |||||||| | |||||
Sbjct 797336 GGGCACAATACTCAATAATTTCAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCT 797277
Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587
|||| || ||| |||||| ||||||||||||||||| | || | || ||||| |
Sbjct 797276 TTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAG 797217
Query 116588 TTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTC 116644
| || | || ||||| || | ||| | | || | | || | | || | ||| ||
Sbjct 797216 TCTGAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTG-ATAGTCTTGCG-ACCCTT 797159
Query 116645 GCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAG 116703
| ||||||| |||||| ||| ||| || ||||| ||||| ||| || ||| || | |
Sbjct 797158 G-CCCTCCTTCTCGTATTTTTCGTAAAGAGCCTCGAACTCCTCA-CCGTAGCAGTCGGCG 797101
Query 116704 AGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 116763
|| || || || | || || | || | ||| | ||| || ||||| ||||||
Sbjct 797100 AGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTC 797041
Query 116764 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 116823
|| || || || |||||||| || || ||| || || || || | || || |
Sbjct 797040 ATAAAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTA 796981
Query 116824 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 116883
|| || || || | || | || || | || ||| | |||||| || || |||||
Sbjct 796980 CCGTGGTTCTTTCGGAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAG 796921
Query 116884 ACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939
| || | | ||| | || | | ||| |||| | ||||| | || || |||
Sbjct 796920 ATGGCAAAAGCACCGGGTCGCTTGTTG-CCACCCTGATCGACATAGCGAGCAGTGTTGTT 796862
Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGA 116997
|| || |||||||| |||| | || | ||| || || || || ||| || ||
Sbjct 796861 GAAGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGA 796802
Query 116998 GACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 117057
| | | || | | | ||| | || || ||||||||| || ||| ||| |||||
Sbjct 796801 GCC--AGTAGCACGAATACGGTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATC 796744
Query 117058 TGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 117117
|| || | ||||| | ||||||| || || || ||| |||| | |||
Sbjct 796743 ATGGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACC 796684
Query 117118 AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 117177
| |||||| |||| ||| ||| || ||||||||||||||||| || || | ||
Sbjct 796683 AAGAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCA 796624
Query 117178 TGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 117221
|| || | | | ||| ||||||| | ||| |||||||||||
Sbjct 796623 TG--TGTAAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGAC 796580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613494692121960
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