Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq822 107 3e-18 >seq822 Length=1165972 Score = 107 bits (118), Expect = 3e-18 Identities = 442/679 (65%), Gaps = 16/679 (2%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATGCCGG 203900 || || ||||||||||| | | || | |||| |||| | | || ||||||||||||| Sbjct 798285 TCAACAGTGAACTGAATAG-GAGCAGCAGCAG-CCTGTGTGCGAAGGTAGTACATGCCGG 798228 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| || || | ||| || | |||||| | | |||| || | |||| Sbjct 798227 TCTTGAGACCAAGTTTCCAGCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGT 798168 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019 | |||||| |||||||| |||||| ||||| ||||| ||| || || || |||||| Sbjct 798167 CCTTCATGTGGATGTTCAGTGACTGGGACTGGTCAATGAA-GGCACCTCGGTCAGCGGCC 798109 Query 204020 ATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 || | | | ||| ||| ||||||||||| || ||||| ||| | || | Sbjct 798108 ATCTGAACGACCTGGCG--CTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACAT 798051 Query 204078 GTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 ||| | | | | || |||| | || || || || || || | | || || Sbjct 798050 CAGCAGGGATGT-TGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTC 797992 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | | || ||||| |||| || || ||| | || |||||||| | | Sbjct 797991 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGGTTGACAACC 797932 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || || || | || || | ||| | | | |||| |||| | || ||||| | Sbjct 797931 TGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 797872 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 ||||||||||| | |||||||| ||| ||||| || ||||| ||||| |||||||| | Sbjct 797871 TCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 797812 Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCT-TCAGAGAGGTCCAGTCGTGCATCGCACT 204375 || || | ||||| | | | || | | | || |||| |||||| | || Sbjct 797811 TTACGGATACCGTGTGTCTTGA-CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGA 797753 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435 ||| || ||| ||||||||||||||| | ||| || | | | | || ||||||| | Sbjct 797752 GGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAA 797693 Query 204436 CGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCATGGCGTGATAGT 204494 || | || || ||||| | |||||| ||||| ||||| | | ||| | || Sbjct 797692 GGTGGAGTAGGGACCCTCCTCCTTGGCCAGC-TGCACGGAGGCAGTGAGGGCAGCGTGGT 797634 Query 204495 ACATGGTCTCAAAGATCTG 204513 | |||||||| |||||||| Sbjct 797633 AGATGGTCTCGAAGATCTG 797615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138988773360