Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq822 208 9e-49
seq1030 145 9e-30
>seq822
Length=1165972
Score = 208 bits (230), Expect = 9e-49
Identities = 1135/1791 (63%), Gaps = 59/1791 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| | ||| ||||||| || | | |||||| || || ||||| || ||
Sbjct 796523 CCTCAGCATATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGACGATATCGAGCGAGTC 796582
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
|||||||||||| || ||||||| | | || | || || | || || ||||||
Sbjct 796583 TTGGAGACATACAACCTGATGTCCAGCAAATTCTTTACACATGCCTCTCCCACACTCTTC 796642
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||||||||| || |||||| |||| ||| ||| | | | | ||||| ||
Sbjct 796643 AACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGATATGAAGGACGAC 796702
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| | ||||| |||| ||||||| |||||| ||||| ||| ||||||
Sbjct 796703 AGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGA 796762
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909
||||| || || || | || | | | || | | ||| || | | ||||| |
Sbjct 796763 GGTATTGGTCTGAACGTGCACCGTATTCGTGCTACT--GGCTCCTACATCGCCGGTACCA 796820
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| ||| ||| | || || |||| |||||||| || || ||| ||| || |||||||
Sbjct 796821 ACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTATG 796880
Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023
| | || | ||| ||| | | || || | || |||| || ||||| ||||
Sbjct 796881 TCGATCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGGC 796937
Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083
|| | ||| || | || |||||||| | || ||||| ||| | ||||||| ||
Sbjct 796938 ACTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGTG 796997
Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143
||| || || ||| ||| || ||||| || ||||| || |||||| | ||||| |||
Sbjct 796998 CCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAGA 797057
Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203
|| | ||| | || | || || || || || || ||| |||| | ||||
Sbjct 797058 ACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGTG 797117
Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGT 112261
||||||| || || || ||| ||| ||||| |||| | | | | | | || ||| |
Sbjct 797118 AGGAGTTCGAGGCTCTTTACGAAAAATACGA-GAAGGAGGGCAAGGGTC-GCAAGACTAT 797175
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| || | || | | ||| | || ||||| || |||| || |||||||| | || |
Sbjct 797176 -CAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACCCTT 797234
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| || |||||||||| ||||| || |||||||| | || |||
Sbjct 797235 TCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGCACCATCC 797294
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
||||| ||||| || || ||||| | || | | | | || ||| ||||| |
Sbjct 797295 GAAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCCTGACGAGGTCGCTGTCT 797354
Query 112441 GTAACCTCGCATCAATCGCTCTCCC---------CAAGTATG-TGGATCCAGAGACAAAG 112490
| ||||| || || | ||||| || ||| || | || || | | | |
Sbjct 797355 GCAACCTTGCCTCTCTAGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTG---CTACG 797411
Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550
|| || | | || | ||||| || | | ||| | ||||| ||||
Sbjct 797412 AC--TTCA-----AGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAG 797464
Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610
| || || || ||||| || | ||||| || || ||| | |||||
Sbjct 797465 ATCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGCAACATGCGCCACCGA 797524
Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 112669
|| |||||||||||||| || || || || |||| ||| || || || ||| | ||
Sbjct 797525 CCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 797583
Query 112670 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729
|| || ||| || || |||| || || || ||||| || || ||||| ||
Sbjct 797584 CGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGC 797643
Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
|| || | || |||| ||| || ||||| || ||||| |||| ||
Sbjct 797644 CCTCACTGCCTCCGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 797703
Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 112849
||| || || | || | || || || || |||||| | | || || | ||
Sbjct 797704 TCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTG 797763
Query 112850 CGACTGGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907
|||||||| ||| || || | | | ||||| | ||| | ||||||||||| |
Sbjct 797764 GGACTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGTATCCGTAACAGTCTGCTC 797821
Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967
| || || ||||| || ||| ||| | || || |||| || || || ||||| ||
Sbjct 797822 CTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCGAG 797881
Query 112968 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027
|||||||| | |||||||| | | || | |||||| || ||||| | |||||||
Sbjct 797882 CCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAA- 797940
Query 113028 AAGCATCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083
| || || | | ||||| || || ||||| |||||| | | ||||||| |
Sbjct 797941 ---CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAA 797997
Query 113084 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAA 113143
| ||| | | | |||||||||||| || ||| | || || | ||| | ||
Sbjct 797998 CCGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCTGATGTCAA 798057
Query 113144 GAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203
| |||| || |||||||| || | | ||| || | |||||||| ||
Sbjct 798058 GGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGA 798117
Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACG 113261
|| ||| ||||||||| | |||| ||| |||| | |||| | || |||
Sbjct 798118 CCGAGGTGCCTTCATTGACC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCTACG 798175
Query 113262 ATGTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGAT 113320
||| |||| || | ||||||| | | || | ||||| |||||||| || || ||
Sbjct 798176 ATGGGCAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAACTTGGTCTCAAGACCGGCAT 798234
Query 113321 GTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371
||| ||||| || | |||| || || |||||||||| | ||||
Sbjct 798235 GTACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 798285
>seq1030
Length=250146
Score = 145 bits (160), Expect = 9e-30
Identities = 352/522 (67%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
|||||||| || ||| | |||||||| |||||| | |||| ||||| | || | | |
Sbjct 123398 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAATCGCCTGACT 123457
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
| |||| || ||| | ||||||| || ||||| |||| || ||||| |||
Sbjct 123458 GCCGATGAGCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATT 123517
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| || | | || || ||||| || |||| | || || | |
Sbjct 123518 GTCAACGAGAACCTCGTTGAGCGATTCAGTGGCGAGGTCCAGATCCCC-GAGGCTCGTTG 123576
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||| | | || | |||| ||| | | | ||| ||||| ||| ||||
Sbjct 123577 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCCCTTCTCA 123635
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 102110
| |||| || || ||||| || || ||| | | ||||| | ||||| | ||
Sbjct 123636 TTGACACCTACATCAAGGAGCCCGCCCAGC-GAACCTACCTCTTCAACGCCATTGAGACC 123694
Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 102169
|||| || || | |||||| || || ||||| || ||| | | | || | | |
Sbjct 123695 ATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 123754
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
| ||||||| |||| ||| | || || || ||||||||||||||||||| ||| |
Sbjct 123755 T-CCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 123813
Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289
||| | |||| | |||||||||||||| ||||||||||| || || |||||||||
Sbjct 123814 CTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAA 123873
Query 102290 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||| ||||||||||| ||||| |||||| || |||||
Sbjct 123874 CGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGC 123915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620729744614320
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