Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq822 228 1e-54
seq1030 152 6e-32
seq1070 82.4 9e-11
>seq822
Length=1165972
Score = 228 bits (252), Expect = 1e-54
Identities = 1142/1782 (64%), Gaps = 59/1782 (3%)
Strand=Plus/Minus
Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610
|||| | |||||||||| || || |||| | || || |||||||| ||||||
Sbjct 798285 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTC 798226
Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669
||||| || ||||||| || | || | |||||| | || |||| |||||| ||
Sbjct 798225 TTGAGACCAAGTTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTC 798167
Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727
| |||| | |||| ||| |||| ||||||||||| ||| || | || |||
Sbjct 798166 CTTCATGTGGATGTTCAGTGACTGGGACT--GGTCAATGAAGGCACCTCGGTCAGCGGCC 798109
Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787
|| | || ||| | | || ||||| || || || ||| ||||| ||||
Sbjct 798108 ATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCA 798049
Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844
| ||||| | | || || ||||| ||||| | | || ||| || | | ||||
Sbjct 798048 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 797992
Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904
||| | | |||||| ||||| || | || || |||| | |||||||| |
Sbjct 797991 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGGTTGACAACC 797932
Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964
||||| || |||||| | || | | |||||||| | |||||||| || |||||
Sbjct 797931 TGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 797872
Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024
|| || || |||| || || | ||| ||| || ||||| || || | | ||||||
Sbjct 797871 TCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 797812
Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079
||||| | ||| | | ||||| ||||| ||| | |||||||| || | |
Sbjct 797811 TTACGGATACCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 797755
Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139
| || || || |||| |||| || || || || | || | || | |||||| ||||
Sbjct 797754 GAG-GGCTTGACGTTCC-ACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCT 797697
Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198
|| || |||| ||| | | | |||| | ||| | || |||| |||
Sbjct 797696 TGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 797638
Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258
|| || ||||| || ||||| | || | ||| || || ||| || || |
Sbjct 797637 TGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGC 797578
Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317
||| || | || || |||| || || || |||||||| | |||||| |||| |||
Sbjct 797577 ATGCG-CAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTG 797519
Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCG 106374
||||| || || | ||| || ||| || || || || ||| ||||
Sbjct 797518 GCGCATGTTG--CTGTTGCG-AGCCTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTT 797462
Query 106375 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGC 106433
||| || || |||||| || ||| || || || || || | | || | ||
Sbjct 797461 GTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGA-AGTCGTA---GC 797406
Query 106434 GAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCG 106490
| ||| || | ||| | || || || | || || | ||||| |||||
Sbjct 797405 AGGCCTCATCGTAGTTGATGAAGGAAGGCAGAGCTAGAGAGGCAAGGTTGCAGACAGCGA 797346
Query 106491 TCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCC 106550
||| || | ||||| | |||||| || |||| ||| ||||| || || |
Sbjct 797345 CCTCGTCAGGGGCACAATACTCAATAATTTCAGTGCACAGGTTAGAACTTCGGATGGTGC 797286
Query 106551 CCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCC 106610
| | ||||||||||| ||||| ||| || |||||||||||||||||| | || | |
Sbjct 797285 CGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAAAGGGTTTC 797226
Query 106611 CCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC-TGGTACAATGGC 106668
| ||||| ||||| | || ||||| || | ||| | | || | | | || || | ||
Sbjct 797225 CAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTGATAGTCTTGC 797166
Query 106669 GTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 106727
| ||| | |||||| |||||| ||| ||| || || || |||||||||||
Sbjct 797165 ---GACCCTTGCCCTCCTTCTCGTATTTTTCGTAAAGAGCCTCGAACTCCTCACCGTAGC 797109
Query 106728 CGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAA 106787
||||| ||| || || || || || || | || | ||| | ||| || ||||
Sbjct 797108 AGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAA 797049
Query 106788 CCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCC 106846
| |||||||| ||||| || || ||||| |||| || || || | ||| || ||
Sbjct 797048 CACGCTTCATAAAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGA-CC 796990
Query 106847 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 106906
|| || | ||| ||||| ||| | |||||||| || | || ||| | |||||| |||
Sbjct 796989 TCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGC 796930
Query 106907 TCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCT 106963
|| || |||| || | || || ||| ||| | |||| |||||||| ||
Sbjct 796929 TCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCA 796870
Query 106964 GTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCG 107022
||| ||| || || |||||||| |||| || || | ||| ||| || || || ||
Sbjct 796869 GTGTTGTTGAAGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCG 796810
Query 107023 A-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 107081
| || ||| | | || | | | || | || || |||||||| |||||| ||
Sbjct 796809 ATGTAGGAG--CCAGTAGCACGAATACGGTGCACGTTCAGACCAATACCTCCAGCCATCT 796752
Query 107082 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 107141
| ||||| ||||| | | ||||| | ||||| || | || ||| |||||
Sbjct 796751 TGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCA 796692
Query 107142 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTG 107201
| ||| | ||||||| |||| || || || |||||||| |||||||| || |
Sbjct 796691 TATCGACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGG 796632
Query 107202 GTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259
| | || || || | | | ||| ||||||| || ||||||||||||||| ||
Sbjct 796631 GAGAGGCATG--TGTAAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGACTCGCTC 796574
Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
|| || || || ||| || | | ||||||||| | |||
Sbjct 796573 GATATCGTCACCCCAGATACCAACAGACACACGCATGATCAT 796532
>seq1030
Length=250146
Score = 152 bits (168), Expect = 6e-32
Identities = 533/818 (65%), Gaps = 27/818 (3%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| ||| ||||| ||||| |||||
Sbjct 124203 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 124144
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
|||||||| || || | || || | | | | || |||| |||||
Sbjct 124143 AAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACGAGGA 124089
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
||||||| | || ||||||| |||| ||| ||||| ||||| |||| ||
Sbjct 124088 GACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGGG 124029
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||| ||||| || || || |||| | | |||||| || || || | | ||||
Sbjct 124028 CACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 123969
Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| ||||| | | | ||| | | ||| | || | || ||| || |||||
Sbjct 123968 CCTGGATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCAA 123912
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||||||||||||||| || || || || || || |||||| ||||| ||||
Sbjct 123911 AGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCA 123852
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397
||||||| |||||||| | ||| | |||| | || | ||| ||||||||||||||
Sbjct 123851 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCT 123792
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456
| ||| || || |||| || |||| ||| |||||| ||| | || | | | ||||
Sbjct 123791 CAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 123733
Query 117457 TTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAAC 117516
|| ||||| | |||||||| || || || | || | ||||| | || |
Sbjct 123732 CGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAGG 123673
Query 117517 T-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCC 117575
| | ||| | | ||||| ||||| ||||||| | || || || |||
Sbjct 123672 TAGGTTC-GCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGGTCTCGGA 123614
Query 117576 ATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCA 117634
||| | | | ||| ||| | || | ||||||| | || || ||| ||||| |
Sbjct 123613 ATGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCAACGAGCCTCGGGGATCTGGA 123555
Query 117635 CTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAG 117693
| || || | ||| | | | || ||||| ||||| ||||| || |||| |||
Sbjct 123554 CCTC-GCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 123496
Query 117694 AATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCG 117750
|| || ||||||| | ||| || |||| || ||||| | |||||||||
Sbjct 123495 AAGGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGATTGTTCCAGTCG 123436
Query 117751 TCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
| ||||| ||||| | ||||| || || ||||||||
Sbjct 123435 TGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 123398
>seq1070
Length=1195525
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || |||| || |||||||| |||||| |||||| ||| | || || |
Sbjct 734190 ATGGACGCATTGCCCCTCGATCCGGCCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 734249
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| || ||| |||| || ||| | ||||| ||| | || ||||| || ||
Sbjct 734250 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTTTTCAACCATAACGAAT 734309
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||||||||||| ||| | || || ||||| || |||||||| || ||||||
Sbjct 734310 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 734362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589968771766440
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