Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq822 228 1e-54 seq1030 152 6e-32 seq1070 82.4 9e-11 >seq822 Length=1165972 Score = 228 bits (252), Expect = 1e-54 Identities = 1142/1782 (64%), Gaps = 59/1782 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| |||||| Sbjct 798285 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTC 798226 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || ||||||| || | || | |||||| | || |||| |||||| || Sbjct 798225 TTGAGACCAAGTTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTC 798167 Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727 | |||| | |||| ||| |||| ||||||||||| ||| || | || ||| Sbjct 798166 CTTCATGTGGATGTTCAGTGACTGGGACT--GGTCAATGAAGGCACCTCGGTCAGCGGCC 798109 Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 || | || ||| | | || ||||| || || || ||| ||||| |||| Sbjct 798108 ATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCA 798049 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844 | ||||| | | || || ||||| ||||| | | || ||| || | | |||| Sbjct 798048 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 797992 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 ||| | | |||||| ||||| || | || || |||| | |||||||| | Sbjct 797991 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGGTTGACAACC 797932 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || |||||| | || | | |||||||| | |||||||| || ||||| Sbjct 797931 TGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 797872 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || || |||| || || | ||| ||| || ||||| || || | | |||||| Sbjct 797871 TCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 797812 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079 ||||| | ||| | | ||||| ||||| ||| | |||||||| || | | Sbjct 797811 TTACGGATACCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 797755 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139 | || || || |||| |||| || || || || | || | || | |||||| |||| Sbjct 797754 GAG-GGCTTGACGTTCC-ACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCT 797697 Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198 || || |||| ||| | | | |||| | ||| | || |||| ||| Sbjct 797696 TGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 797638 Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258 || || ||||| || ||||| | || | ||| || || ||| || || | Sbjct 797637 TGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGC 797578 Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 ||| || | || || |||| || || || |||||||| | |||||| |||| ||| Sbjct 797577 ATGCG-CAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTG 797519 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCG 106374 ||||| || || | ||| || ||| || || || || ||| |||| Sbjct 797518 GCGCATGTTG--CTGTTGCG-AGCCTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTT 797462 Query 106375 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGC 106433 ||| || || |||||| || ||| || || || || || | | || | || Sbjct 797461 GTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGA-AGTCGTA---GC 797406 Query 106434 GAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCG 106490 | ||| || | ||| | || || || | || || | ||||| ||||| Sbjct 797405 AGGCCTCATCGTAGTTGATGAAGGAAGGCAGAGCTAGAGAGGCAAGGTTGCAGACAGCGA 797346 Query 106491 TCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCC 106550 ||| || | ||||| | |||||| || |||| ||| ||||| || || | Sbjct 797345 CCTCGTCAGGGGCACAATACTCAATAATTTCAGTGCACAGGTTAGAACTTCGGATGGTGC 797286 Query 106551 CCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCC 106610 | | ||||||||||| ||||| ||| || |||||||||||||||||| | || | | Sbjct 797285 CGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAAAGGGTTTC 797226 Query 106611 CCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC-TGGTACAATGGC 106668 | ||||| ||||| | || ||||| || | ||| | | || | | | || || | || Sbjct 797225 CAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTGATAGTCTTGC 797166 Query 106669 GTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 106727 | ||| | |||||| |||||| ||| ||| || || || ||||||||||| Sbjct 797165 ---GACCCTTGCCCTCCTTCTCGTATTTTTCGTAAAGAGCCTCGAACTCCTCACCGTAGC 797109 Query 106728 CGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAA 106787 ||||| ||| || || || || || || | || | ||| | ||| || |||| Sbjct 797108 AGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAA 797049 Query 106788 CCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCC 106846 | |||||||| ||||| || || ||||| |||| || || || | ||| || || Sbjct 797048 CACGCTTCATAAAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGA-CC 796990 Query 106847 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 106906 || || | ||| ||||| ||| | |||||||| || | || ||| | |||||| ||| Sbjct 796989 TCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGC 796930 Query 106907 TCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCT 106963 || || |||| || | || || ||| ||| | |||| |||||||| || Sbjct 796929 TCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCA 796870 Query 106964 GTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCG 107022 ||| ||| || || |||||||| |||| || || | ||| ||| || || || || Sbjct 796869 GTGTTGTTGAAGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCG 796810 Query 107023 A-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 107081 | || ||| | | || | | | || | || || |||||||| |||||| || Sbjct 796809 ATGTAGGAG--CCAGTAGCACGAATACGGTGCACGTTCAGACCAATACCTCCAGCCATCT 796752 Query 107082 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 107141 | ||||| ||||| | | ||||| | ||||| || | || ||| ||||| Sbjct 796751 TGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCA 796692 Query 107142 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTG 107201 | ||| | ||||||| |||| || || || |||||||| |||||||| || | Sbjct 796691 TATCGACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGG 796632 Query 107202 GTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259 | | || || || | | | ||| ||||||| || ||||||||||||||| || Sbjct 796631 GAGAGGCATG--TGTAAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGACTCGCTC 796574 Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 || || || || ||| || | | ||||||||| | ||| Sbjct 796573 GATATCGTCACCCCAGATACCAACAGACACACGCATGATCAT 796532 >seq1030 Length=250146 Score = 152 bits (168), Expect = 6e-32 Identities = 533/818 (65%), Gaps = 27/818 (3%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| ||| ||||| ||||| ||||| Sbjct 124203 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 124144 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 |||||||| || || | || || | | | | || |||| ||||| Sbjct 124143 AAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACGAGGA 124089 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || ||||||| |||| ||| ||||| ||||| |||| || Sbjct 124088 GACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGGG 124029 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| ||||| || || || |||| | | |||||| || || || | | |||| Sbjct 124028 CACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 123969 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | ||||| | | | ||| | | ||| | || | || ||| || ||||| Sbjct 123968 CCTGGATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCAA 123912 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||||||||||||||| || || || || || || |||||| ||||| |||| Sbjct 123911 AGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCA 123852 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| | |||| | || | ||| |||||||||||||| Sbjct 123851 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCT 123792 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456 | ||| || || |||| || |||| ||| |||||| ||| | || | | | |||| Sbjct 123791 CAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 123733 Query 117457 TTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAAC 117516 || ||||| | |||||||| || || || | || | ||||| | || | Sbjct 123732 CGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAGG 123673 Query 117517 T-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCC 117575 | | ||| | | ||||| ||||| ||||||| | || || || ||| Sbjct 123672 TAGGTTC-GCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGGTCTCGGA 123614 Query 117576 ATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCA 117634 ||| | | | ||| ||| | || | ||||||| | || || ||| ||||| | Sbjct 123613 ATGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCAACGAGCCTCGGGGATCTGGA 123555 Query 117635 CTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAG 117693 | || || | ||| | | | || ||||| ||||| ||||| || |||| ||| Sbjct 123554 CCTC-GCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 123496 Query 117694 AATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCG 117750 || || ||||||| | ||| || |||| || ||||| | ||||||||| Sbjct 123495 AAGGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGATTGTTCCAGTCG 123436 Query 117751 TCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 | ||||| ||||| | ||||| || || |||||||| Sbjct 123435 TGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 123398 >seq1070 Length=1195525 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || |||||||| |||||| |||||| ||| | || || | Sbjct 734190 ATGGACGCATTGCCCCTCGATCCGGCCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 734249 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| | ||||| ||| | || ||||| || || Sbjct 734250 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTTTTCAACCATAACGAAT 734309 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 734310 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 734362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589968771766440