Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq680 107 2e-18
>seq680
Length=1261114
Score = 107 bits (118), Expect = 2e-18
Identities = 316/482 (66%), Gaps = 9/482 (2%)
Strand=Plus/Minus
Query 154629 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 154686
|| || ||| | || | |||||||||| ||| || || | || ||| | || ||||
Sbjct 733527 CAGCCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGTCT--TCGCTGCATCAAGGCTTACC 733470
Query 154687 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 154745
| | ||| || || | ||||| |||| || || | || || | || || || ||
Sbjct 733469 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCTGCTCACGGT 733411
Query 154746 ACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 154805
|| || |||||| ||||| |||||| || ||||| ||||| |||||| ||||| | |
Sbjct 733410 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAATGTGACGGT 733351
Query 154806 GA---TGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 154862
| ||||||| | || || | ||||| || || ||| | || | |||
Sbjct 733350 AAGACTGGTAACCTGGATATTGAGGATCTTAAGGCCAAGTGTGTCAAGCATGCTGATGAG 733291
Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922
|| | ||| ||| ||||||| || ||||| ||||| ||||| | | || |
Sbjct 733290 CTTGCTGCTATCATGGTTACATATCCCTCTACTTTCGGTGTCTTTGAGCCCGAGATCAAG 733231
Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982
|| | ||| | | || || || |||| |||| || || | || || || || |
Sbjct 733230 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 733171
Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042
|| || ||| | || || | || |||| ||||| ||||| || ||||| |||
Sbjct 733170 AACGCCCAGATCGGTCTCTGCAGCCCCGGTGACATCGGTGCTGATGTCTGCCATCTCAAC 733111
Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102
| || || || ||||||||||| || || ||||| ||||| || || || || || | |
Sbjct 733110 CTCCACAAGACCTTCTGTATTCCCCACGGTGGTGGTGGTCCCGGTGTTGGCCCCATTGCT 733051
Query 155103 GT 155104
||
Sbjct 733050 GT 733049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579200991299040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |