Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq680 134 2e-26
>seq680
Length=1261114
Score = 134 bits (148), Expect = 2e-26
Identities = 322/482 (67%), Gaps = 9/482 (2%)
Strand=Plus/Minus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361
|| || ||| | || | |||||||||| ||| || || | || ||| | || ||||
Sbjct 733527 CAGCCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGTCT--TCGCTGCATCAAGGCTTACC 733470
Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420
| | ||| || || | ||||| |||| || || | || || | || || || ||
Sbjct 733469 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCTGCTCACGGT 733411
Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480
|| || ||||| || || | ||||| || ||||| ||||| |||||| ||||| | |
Sbjct 733410 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAATGTGACGGT 733351
Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537
| ||| ||| | || || | ||||| || || ||| | || | |||
Sbjct 733350 AAGACTGGTAACCTGGATATTGAGGATCTTAAGGCCAAGTGTGTCAAGCATGCTGATGAG 733291
Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597
|| | ||| ||| |||||||||| ||||| ||||| ||||| | | ||||
Sbjct 733290 CTTGCTGCTATCATGGTTACATATCCCTCTACTTTCGGTGTCTTTGAGCCCGAGATCAAG 733231
Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657
|| | ||| | |||| || ||| |||| |||| || || | || ||||| || |
Sbjct 733230 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 733171
Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717
|| || ||| | ||||| | || ||||| ||||| ||||| || ||||| |||
Sbjct 733170 AACGCCCAGATCGGTCTCTGCAGCCCCGGTGACATCGGTGCTGATGTCTGCCATCTCAAC 733111
Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777
| || ||||| ||||||||||| || || ||||| ||||| || || || || |||| |
Sbjct 733110 CTCCACAAGACCTTCTGTATTCCCCACGGTGGTGGTGGTCCCGGTGTTGGCCCCATTGCT 733051
Query 159778 GT 159779
||
Sbjct 733050 GT 733049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588039211106160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |