Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq486 96.9 3e-14
seq1297 95.1 1e-13
>seq486
Length=637844
Score = 96.9 bits (106), Expect = 3e-14
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||| ||||| || |||||||||||| ||| || ||| ||||| || || || ||||
Sbjct 83039 GAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCG 83098
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
|| |||||||| || || ||||| || || | |||||||||||||| || || ||
Sbjct 83099 GCCGTCCTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATACCCTC 83158
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAG 563434
|| || || || ||| || || || || ||||| | ||| | | |||||||
Sbjct 83159 CTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATC-GGATGACTCAACCTCGAGAG 83217
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGA 563464
| | |||||| ||||| || || || ||||
Sbjct 83218 TGATAGTTTTGCCAGTGAGTGTCTTGACGA 83247
>seq1297
Length=585845
Score = 95.1 bits (104), Expect = 1e-13
Identities = 126/175 (72%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 550004 GATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATT 550063
||| | ||||||||||| || ||||| ||||| ||| || || || || |||||| |
Sbjct 71248 GATCTTGGAACCACATACAGCTGTGTCGGTGTGATGCAGAAGGGCAAGGTCGAAATTCTC 71307
Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123
| ||| ||||| |||||| ||| || || ||||| || | ||||| || ||| | |
Sbjct 71308 GTCAACGATCAGGGTAACCGAATCACCCCCTCTTACGTCGCCTTCACCGAGGATGAGCGT 71367
Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTT 550178
|| ||||| || || || || | || ||| | | ||| || || || |||||||
Sbjct 71368 TTGGTTGGAGACGCCGCCAAGAACCAGGCCGCCGCTAACCCCACGAACACTATTT 71422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029209745364190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |