Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq822 363 3e-95
seq1030 158 2e-33
>seq822
Length=1165972
Score = 363 bits (402), Expect = 3e-95
Identities = 1235/1891 (65%), Gaps = 106/1891 (6%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 798282 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTCTTG 798223
Query 212613 AGGCCCTTGCCCCAGCCGTGCAT-GTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTG 212671
|| || |||||| |||| |||||| |||| || || | || | ||
Sbjct 798222 AGACCAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTCCT- 798165
Query 212672 GTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCT 212731
|||| |||| | |||||| ||||| |||||| ||||| | | |
Sbjct 798164 -TCAT----GTGG---------ATGTTCAGTGACTGGGACTGGTCAATGAAGGCACCTCG 798119
Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791
|||||||||||| | | || | | ||| || | |||||| || ||||| | | |
Sbjct 798118 GTCAGCGGCCATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGC 798059
Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC-- 212849
|||| || | |||| | ||| |||||||| | || || || |||||
Sbjct 798058 CTTGACATCAGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAGCAA 798006
Query 212850 TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGG 212903
|| | ||| ||| | ||| ||| || ||| || | ||| ||||| ||
Sbjct 798005 TG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAAC 797947
Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963
|||||||| | |||||| ||||| | ||| || | | |||||| | ||| || |||
Sbjct 797946 CAGGGGTTGACAACCTGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTG 797887
Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023
|||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| |||
Sbjct 797886 TAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGA 797827
Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TCTGC 213079
|| | || |||||||| | | ||||| | | ||| | ||||| ||| |
Sbjct 797826 GCAAGGAGCAGACTGTTACGGATACCGTGT--GTCT-TGACTTCCTCTCGAAGAGTCT-C 797771
Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT 213139
||||||||| | |||| | ||| |||||||||||||| ||||| | |||
Sbjct 797770 CCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCGAACTGGAGGAT 797720
Query 213140 GCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCA 213195
|| |||| |||| ||||| | | | ||||||||| || | |||||||||||
Sbjct 797719 ACC----CTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCA 797664
Query 213196 GCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGC 213254
||| ||| ||| || |||||||||| ||||||||| || || |||| | ||||||||
Sbjct 797663 GCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGC 797605
Query 213255 TTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314
| ||||| || ||| ||||||||| || |||| ||||||| || |||
Sbjct 797604 TCACGAGCCTCGGGTGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGGCCC 797545
Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGG 213373
|| || |||| || ||||||| ||| | || ||| ||| |||| |||| | ||
Sbjct 797544 TGAACACCGAGACCAATGGGTCGGTGGCGCATGTTGCTGTTGCGAGC-CTCCGGGACAGG 797486
Query 213374 GTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGC 213433
||| ||| ||||||||||||||| |||||||| | | || | |||| | |
Sbjct 797485 GTAGTGGTTCACGTCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTCGTG 797426
Query 213434 CAGGTACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGC 213487
|| || | ||||| |||||| | ||| | | || |||||| ||
Sbjct 797425 CA---AC---TTCTTGAAGTCGTAGCAGGCCTCATCGTAGTTGATGAAGGAAGGCAGAGC 797372
Query 213488 GATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGT 213547
| ||| |||||||| || || ||||| | || | | ||||| || || || ||
Sbjct 797371 TAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCAATAATTTCAGT 797312
Query 213548 GCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-G 213606
||||||||| | |||||||||||| ||||||| ||| ||| ||||| | || |
Sbjct 797311 GCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGG-TTGCTCTTGCGGTTACAGG 797253
Query 213607 AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--T 213664
|||||||||||||||| | ||| || ||||| ||| | | | || | ||||
Sbjct 797252 CATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAA--TGGCATA 797195
Query 213665 CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTC 213724
||| || | | ||||||| | | ||| | | | | |||||| | |||
Sbjct 797194 CCAAAGCTTCTGAGCCTTGA-TAGTCTTGCGACCCTTGCCCTCCT--TCTCGTATTTTTC 797138
Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACA 213784
||| || | | ||| || | || || | | || || || || ||| ||
Sbjct 797137 GTAAAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCA 797078
Query 213785 CATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844
||| || ||||||| |||| | | || | || ||| || || || |||| ||| ||
Sbjct 797077 CATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAG 797018
Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904
||| ||||||||| | || | ||| ||| || ||| || || ||||| ||
Sbjct 797017 GGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAG 796958
Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCT 213961
|| || |||| || | |||||| ||||| | |||||||||||| || || | || |
Sbjct 796957 GAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT 796898
Query 213962 CTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTA 214017
||||| ||||| || | | | || | || ||||||||| || || | || |
Sbjct 796897 GTTGCCACCCTGATCGA----CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAA 796842
Query 214018 CCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGT 214074
| | |||||||| ||| |||||||| || || || || ||||| | || | | |
Sbjct 796841 CAACGCCGTTGGA-TGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAATACGG 796783
Query 214075 TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAG 214134
||| | | ||| || || || || || ||||||||||||||| ||| | | | ||
Sbjct 796782 TGCACGTTCAGA--CCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAG 796725
Query 214135 TCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCT 214194
| || |||||| | || ||||| || | | | | ||||||||| || | |
Sbjct 796724 TATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGATGACAATT 796665
Query 214195 GGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAG 214254
||||| | | |||| |||||| || ||||| |||||| | | || ||| | |
Sbjct 796664 GGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGG 796605
Query 214255 AGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CG 214313
| | || |||| ||||||| |||| ||| |||| ||| | || |
Sbjct 796604 ACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAGATACCAACAGACA 796545
Query 214314 CACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGT 214371
|| | ||| | ||| ||||| |||| ||| | ||| | | |||||| ||||
Sbjct 796544 CA-CGCATGATCATATGCTGAGGCCGCTCGA--CAATCTTACCGTCAATCTTGAGGAGGT 796488
Query 214372 AGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
|||| ||||||| ||||||||| ||||||||
Sbjct 796487 AGGATCGCTCCAAAGTCTTGAAGCCAAAGTA 796457
>seq1030
Length=250146
Score = 158 bits (174), Expect = 2e-33
Identities = 482/738 (65%), Gaps = 29/738 (4%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 124207 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 124148
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957
||||||| ||||||||| | || || ||| | || ||| | | || |
Sbjct 124147 CATGAAGTCAAAGGGGTTGCTAGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACGAGGA 124089
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| |||||| |||| || || | ||||||| |||||||| | ||||
Sbjct 124088 GACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGGG 124029
Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||| | ||||| ||||| ||||||| ||| || ||||| || | ||
Sbjct 124028 -CACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATG 123970
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGC--------AGGTGCTTGGCATAGAGCA 48128
| || ||| || | || | || | ||||| | | ||| |
Sbjct 123969 TCCT-------GGA-TCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAG---TGGAGGA 123921
Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188
|||||||||||| |||| | || || || || ||||||| ||||||||||| |
Sbjct 123920 GGCAGGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCA 123861
Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248
| || ||||||| || | || ||||||||||| || | || || | || |||||
Sbjct 123860 GGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGA 123801
Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308
|||| ||||| || || ||||| || ||| | || | || || | || ||| ||
Sbjct 123800 AGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCT 123741
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
|||||| | |||||||| |||||||| |||||| || || ||||| |||||
Sbjct 123740 GGATCCATCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGT 123681
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGT 48425
|||||| | | | || | | ||| | ||||| | |||| || | ||
Sbjct 123680 TGAAGAGGTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAG---GGAGT 123624
Query 48426 ACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAA 48485
| |||| || || | ||||| || ||||||||| ||||||||| | |||||
Sbjct 123623 AGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGG 123564
Query 48486 ACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAG 48545
| ||| || || ||||| ||| | || ||||| ||||| || ||||| || |
Sbjct 123563 GGATCTGGACCTCGCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGG 123504
Query 48546 CAGCAAAGAAGGCAAGGA 48563
|||| |||||||||||||
Sbjct 123503 CAGCGAAGAAGGCAAGGA 123486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931513808375040
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