Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq822 282 8e-71
seq1030 197 3e-45
>seq822
Length=1165972
Score = 282 bits (312), Expect = 8e-71
Identities = 849/1284 (66%), Gaps = 59/1284 (5%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||||||||||||||||||||| |||||| ||||||||| ||| | ||||||||
Sbjct 797649 GTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 797591
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
|| ||||||||| ||||| | | ||||| | || || || ||||| || |||| |
Sbjct 797590 TGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGGCCCTGAACACCGAGA 797533
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||| | | ||||| | ||| || || || || || || ||| |
Sbjct 797532 CCAATGGGTCGGTGGCGCATGTTGCTGTTGCGA--GCCTCCGGGACAGGGTAGTGGTTCA 797475
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
||||||| | ||||| ||||| || | | || | | |||||| || |||||
Sbjct 797474 CGTCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCT--- 797418
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
|||| | | | | | |||| || | | | || || || || |
Sbjct 797417 ---TGAAGTCGTAGCAGGCCTCATCGT--AGTTGATGAAGGAAGGC----AGAGCTAGAG 797367
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
||| ||||| || || || |||||||| | ||||| || || || || || |
Sbjct 797366 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCAATAATTTCAGTGCACA 797307
Query 221772 GGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829
|||| | |||| |||||| || |||| || || || |||||| || || ||
Sbjct 797306 GGTTA--GAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATC 797249
Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889
|||||||||||| || || |||||||| ||||||| | ||||| | ||| ||
Sbjct 797248 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAG 797189
Query 221890 TTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGG 221942
| |||| || | | ||| | |||| | | |||| ||||| |
Sbjct 797188 CT-TCTGAGCCTTGATAGTCTTGCGACCCTTGCCCTCCTTCTCGTATTTTTC-------G 797137
Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002
|| ||||| | | |||| |||||||| ||| | ||||| || ||| | ||| |
Sbjct 797136 TAAAGAGCCT--CGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGC 797079
Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062
||||||| |||||| ||| | || || | || ||| || || || |||||||| |
Sbjct 797078 ACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAA 797019
Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122
| || | || || || | || || ||||||| |||| ||| || | ||||| |
Sbjct 797018 GGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAA 796959
Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182
|| || || | |||| |||||| ||||| || |||| ||| | ||| ||||||||||
Sbjct 796958 GGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCT 796899
Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACC 222241
|||||||||||||||| | ||| ||| | |||||||| ||||| | || ||
Sbjct 796898 TGTTGCCACCCTGATCGA-CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACA 796840
Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG 222301
| ||||||||| ||||||||| || ||||| | || || | | ||| |
Sbjct 796839 ACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCAC---GAATACGG 796783
Query 222302 -GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358
||| || || ||||| || || || ||||||||||| ||| ||||||||||
Sbjct 796782 TGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTA 796723
Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418
|| ||||||||| ||| ||| ||||| | | | || || ||||| |||| ||
Sbjct 796722 TCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGATGACAATTGG 796663
Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478
| | | || || ||||| || || |||||| ||| ||||||||| | || |||
Sbjct 796662 GGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGAC 796603
Query 222479 ATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGC 222536
||||| | ||| ||||| | ||||| |||| | ||| ||| || | | || | | |
Sbjct 796602 ATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAGATACCAACA-GACAC 796544
Query 222537 ATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTA 222594
| | |||| ||| | ||| |||| ||| ||| || | | || ||| |||||
Sbjct 796543 A-CGCATGATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCT--TGAGGAGGTA 796487
Query 222595 CGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCAC 222654
||| |||| ||||||||| |||||||| | | | || || | | | | || |
Sbjct 796486 GGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAAT 796427
Query 222655 GGCGGCGTCCAGCTCCGACTTGTG 222678
||||| ||||| |||| ||||||
Sbjct 796426 GGCGGAGTCCAACTCCTCCTTGTG 796403
Score = 96.9 bits (106), Expect = 6e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | ||
Sbjct 797941 GTTGACAACCTGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 797882
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||||||||| ||||||| || ||||| || ||||| || || |
Sbjct 797881 CTCGAAGCACTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAG 797822
Query 221236 CAGCAGACTGTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACA 221295
||||||||||| || | ||| | | |||| || || || || | |||||| ||
Sbjct 797821 GAGCAGACTGTTACGGATACCGTGTGTCTTGACTTCCTCTCGAAGAGTCTCCCAGTCCCA 797762
Query 221296 G 221296
|
Sbjct 797761 G 797761
>seq1030
Length=250146
Score = 197 bits (218), Expect = 3e-45
Identities = 397/586 (68%), Gaps = 11/586 (2%)
Strand=Plus/Plus
Query 25463 TAACACACAAAGATATAT--GGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGC 25520
||||| || | |||| || || | ||||||||||||||| | || |||||| ||
Sbjct 123346 TAACAGACCATGATAGATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGC 123405
Query 25521 CGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCA 25580
||| ||||||||||| ||||||| | ||| |||| || || | | ||| |
Sbjct 123406 CGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAATCGCCTGACTGCCGATGA 123465
Query 25581 GCATTTTCTCAAGT---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGA 25637
||| || || | || | | || ||||| || |||||||||||||| || |||||
Sbjct 123466 GCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATTGTCAACGA 123525
Query 25638 GAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGG 25697
||| || ||| |||||| | || || ||| | ||||| || ||||||||
Sbjct 123526 GAACCTCGTTGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGG 123585
Query 25698 TTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---AC 25754
|||||||| || || || | || || ||| || || ||||| || ||
Sbjct 123586 CTTCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCC---CTTCTCATTGACAC 123642
Query 25755 GTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAG 25814
||||| | || |||| || || || || ||||| ||| ||| || |
Sbjct 123643 CTACATCAAGGAGCCCGCCCAGCGAACCTACCTCTTCAACGCCATTGAGACCATTCCTTG 123702
Query 25815 CATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGG 25874
|||| | |||||| |||||||| |||||| | || | | | ||||
Sbjct 123703 CATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGC 123762
Query 25875 CGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGC 25934
| |||| || || ||||| |||||||| ||||| ||||| ||||||||| | ||||| |
Sbjct 123763 CCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTC 123822
Query 25935 CATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994
||||||||||||||| || || ||||||||| ||| ||| ||||||||||||||
Sbjct 123823 TATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCAT 123882
Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040
| | || ||||||||||||| || ||||||||||| ||| ||
Sbjct 123883 CTCTCGTGATGAGGGTCTCCACACTGACTTTGCCTGCCTCCTCCAC 123928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928825863176640
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