Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq680 125 8e-24 >seq680 Length=1261114 Score = 125 bits (138), Expect = 8e-24 Identities = 320/482 (66%), Gaps = 9/482 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| |||| || || || || ||||| ||||| || || ||||||||||| ||||| || Sbjct 733049 ACAGCAATGGGGCCAACACCGGGACCACCACCACCGTGGGGAATACAGAAGGTCTTGTGG 733108 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| ||||| ||||| || | ||||| | ||| || Sbjct 733109 AGGTTGAGATGGCAGACATCAGCACCGATGTCACCGGGGCTGCAGAGACCGATCTGGGCG 733168 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 733169 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGATCACAGACT 733228 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | ||||| ||||| ||| || |||||||||| ||| ||| | Sbjct 733229 TGCTTGATCTCGGGCTCAAAGACACCGAAAGTAGAGGGATATGTAACCATGATAGCAGCA 733288 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 || ||| | || | ||| || || ||||| | || || | ||| ||| Sbjct 733289 AGCTCATCAGCATGCTTGACACACTTGGCCTTAAGATCCTCAATATCCAGGTTACCAGTC 733348 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | ||||| |||||| ||||| ||||| || |||||| | ||| |||||| || Sbjct 733349 TTACCGTCACATTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 733408 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598 || || || || || | || || || || || |||| ||||| | || || ||| | Sbjct 733409 GTACCGTGAGCAGAAACAGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCCTCG 733468 Query 138599 ATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGT 138656 || || || | ||| || | || || ||| |||||||||| | || | ||| || Sbjct 733469 -TGGTAAGCCTTGATGCAGCGA--AGACCAGCAAACTCACCCTGAGCACCAGAGTTGGGC 733525 Query 138657 TG 138658 || Sbjct 733526 TG 733527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578986595670120