Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq680 125 8e-24
>seq680
Length=1261114
Score = 125 bits (138), Expect = 8e-24
Identities = 320/482 (66%), Gaps = 9/482 (2%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| |||| || || || || ||||| ||||| || || ||||||||||| ||||| ||
Sbjct 733049 ACAGCAATGGGGCCAACACCGGGACCACCACCACCGTGGGGAATACAGAAGGTCTTGTGG 733108
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||| || ||||| ||||| ||||| || | ||||| | ||| ||
Sbjct 733109 AGGTTGAGATGGCAGACATCAGCACCGATGTCACCGGGGCTGCAGAGACCGATCTGGGCG 733168
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || ||||| || | || || |||| |||| || || || | | ||| |
Sbjct 733169 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGATCACAGACT 733228
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
|| |||| | | ||||| ||||| ||| || |||||||||| ||| ||| |
Sbjct 733229 TGCTTGATCTCGGGCTCAAAGACACCGAAAGTAGAGGGATATGTAACCATGATAGCAGCA 733288
Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479
|| ||| | || | ||| || || ||||| | || || | ||| |||
Sbjct 733289 AGCTCATCAGCATGCTTGACACACTTGGCCTTAAGATCCTCAATATCCAGGTTACCAGTC 733348
Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539
| | | ||||| |||||| ||||| ||||| || |||||| | ||| |||||| ||
Sbjct 733349 TTACCGTCACATTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 733408
Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598
|| || || || || | || || || || || |||| ||||| | || || ||| |
Sbjct 733409 GTACCGTGAGCAGAAACAGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCCTCG 733468
Query 138599 ATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGT 138656
|| || || | ||| || | || || ||| |||||||||| | || | ||| ||
Sbjct 733469 -TGGTAAGCCTTGATGCAGCGA--AGACCAGCAAACTCACCCTGAGCACCAGAGTTGGGC 733525
Query 138657 TG 138658
||
Sbjct 733526 TG 733527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578986595670120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |