Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq822 224 1e-53
seq1030 152 6e-32
seq1070 82.4 9e-11
>seq822
Length=1165972
Score = 224 bits (248), Expect = 1e-53
Identities = 1146/1787 (64%), Gaps = 65/1787 (4%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| | ||| ||||||| || | | || ||| || || || || || |||
Sbjct 796523 CCTCAGCATATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGACGATATCGAGCGAGTC 796582
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
|||||||||||| || ||||||| ||| | | | || || || | || || ||||
Sbjct 796583 TTGGAGACATACAACCTGATGTCCAGCAAATTCTTTACA--CATGCCTCTCCCACACTCT 796640
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| |||||||| || || || |||| ||||||| | ||| | ||||| |
Sbjct 796641 TCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGATATGAAGGACG 796700
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | || ||||| | ||||| | | ||||| ||||| ||| |||||
Sbjct 796701 ACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTG 796760
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 75507
| |||||||| || || | || | | | || | | ||| || ||| || ||
Sbjct 796761 GAGGTATTGGTCTGAACGTGCACCGTATTCGTGCTACTGG--CTCCTACATCGCCGGTAC 796818
Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567
|| ||| ||| | || || |||| |||||||| || || ||| ||| || |||||
Sbjct 796819 CAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTA 796878
Query 75568 TGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGGC 75623
||| |||| | | ||| | || | ||| | | || ||||| | || || ||||
Sbjct 796879 TGTCGATCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 796937
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683
| | ||| || | || |||||||| | ||| ||||| ||| | || |||| || ||
Sbjct 796938 ACTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGG-TCCGT 796996
Query 75684 GTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | || || || |||| ||||| || || ||||| |||||||| ||||| ||
Sbjct 796997 GCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAG 797056
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
||| | ||| | || | || || || || || || ||| ||||| |||
Sbjct 797057 AACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGT 797116
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGACT 75859
|||||||| || || || ||| ||| || || ||||||| | | ||| ||||
Sbjct 797117 GAGGAGTTCGAGGCTCTTTACGAAAAATACGAGAAGGAGGGCAAGGGTCGCAA---GACT 797173
Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| | || | | || | ||||| | || ||||| | | ||||| |||||||||| ||
Sbjct 797174 AT-CAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACCC 797232
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
| ||||| ||||||||||| |||||| ||||| ||||||||||| | || || ||
Sbjct 797233 TTTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGCACCAT 797292
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
| || || || || ||||| |||||| | ||||| | || ||| |||||
Sbjct 797293 CCGAAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCCTGACGAGGTCGCTGT 797352
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTTT 76095
||||| | || || | || || || | ||| | || ||| | || |
Sbjct 797353 CTGCAACCTTGCCTCTCTAGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGC---TA 797409
Query 76096 TGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|| | | || || || || || ||| || |||||| || || ||| |||
Sbjct 797410 CGACT-TCAAGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCA 797468
Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
| ||| || || || || ||| || ||| | || || ||||| ||| |||
Sbjct 797469 TCGACGTGAACCACTACCCTGTCCCGGAGGCT-CGCAACAG--CAACATGCGCCACCGAC 797525
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270
| |||||| | |||||||| || || || |||| || || | || ||| | ||
Sbjct 797526 CCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 797584
Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330
|| ||| || || ||| | || | ||||| || ||||| || ||||| ||
Sbjct 797585 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCC 797644
Query 76331 CTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
|| || ||| | |||| | | | ||| |||| || || |||| ||
Sbjct 797645 CTCACTGC-CTCCGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 797703
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAAC 76447
|||||| || | || | || ||||| || |||| |||| || || || || | |
Sbjct 797704 TCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCTC 797761
Query 76448 TACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
| |||||||| | ||| ||||| ||||| | ||| | |||||||||||
Sbjct 797762 TGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGTATCCGTAACAGTCTG 797818
Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564
| | || || ||||| || ||| ||| | || || |||| || || || |||||
Sbjct 797819 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTC 797878
Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624
|| || ||||| | |||||||||| | || | |||||| |||||||| |||||
Sbjct 797879 GAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTC 797938
Query 76625 AACAAGCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680
|| | ||| | |||| ||||| | || ||||| |||||| | | ||||||
Sbjct 797939 AA----CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAA 797994
Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740
| | | ||| | | | |||||||||||| || || | | ||||| | |||| |
Sbjct 797995 GAACCGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCTGATGT 798054
Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGC 76800
|||| ||| || || || ||||| || | | ||| || | ||||||||
Sbjct 798055 CAAGGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGC 798114
Query 76801 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCA 76858
|| || ||| ||||||||| | |||| ||| |||| | |||| | ||
Sbjct 798115 TGACCGAGGTGCCTTCATTGACC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCT 798172
Query 76859 ACGATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGG 76917
|||||| |||| || | |||||| | || | || ||||||| || ||||| |||||
Sbjct 798173 ACGATGGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAACTTGGTCTCAAGACCGG 798231
Query 76918 AATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964
|||||||| || || || |||| || || ||||||||||
Sbjct 798232 CATGTACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCA 798278
>seq1030
Length=250146
Score = 152 bits (168), Expect = 6e-32
Identities = 533/818 (65%), Gaps = 27/818 (3%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGAC---CCTGAAT 64770
|||||||| || || ||||| | ||||| ||||| |||||||||| | ||||| |
Sbjct 123398 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAATCGCCTGACT 123457
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
| |||| || ||| | ||||||| || ||||| |||| || ||||| |||
Sbjct 123458 GCCGATGAGCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATT 123517
Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
|| ||||| || | | | ||| | || || || ||||| ||| || || |
Sbjct 123518 GTCAACGAGAACCTCGTTGAGCGATTCAGTGGC-GAGGTCCAGATCCCCGAGGCTCGTTG 123576
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
||||||| | || | ||| ||| | | | ||| ||| || || || | |
Sbjct 123577 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCCCTTCTCA 123635
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGC-AGTTATTTGAAGCCATCCAAACT 65007
|||||| ||||| ||||| | | ||| | | | || | ||||| | ||
Sbjct 123636 TTGACACCTACATCAAGGAGCCCGCCCAGC-GAACCTACCTCTTCAACGCCATTGAGACC 123694
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
| || || || |||||||| | ||||| || |||| | | | || | |||
Sbjct 123695 ATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTC- 123753
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
|||||| ||| |||| || |||| || || ||| ||||||||||||||| ||| |
Sbjct 123754 CTCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 123813
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
|| | |||| | ||| | |||||||| ||||||||||| ||||| |||||| ||
Sbjct 123814 CTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAA 123873
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGAC 65246
|| || || || || ||||||||||||||| || |||||| || ||| || | |
Sbjct 123874 CGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCC-TG--CCTCCTCCACTC 123930
Query 65247 TTTGCGTAA---TAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGA 65303
| | ||| | | ||| | | | ||||| | |||| | | || || ||
Sbjct 123931 TCACCTTAAGGGTCGTGCCAGCAAGCAGATGATCCAGGACATCATCACTGATGCCGTCAC 123990
Query 65304 GATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGA 65363
|||||| | | |||| || || || ||||| ||| || |||| ||||| |||||
Sbjct 123991 CATTGAGCAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAATTCTGA 124050
Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCC 65423
||| |||| ||||||| || | |||||||||||| |||| |
Sbjct 124051 CCTCATGAAGCAGTATATTGAGTTCGTCGCCGATCGTCTCCTCGTCGCTCTTGG-----C 124105
Query 65424 ACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGAT 65478
| | | | | || || | || || |||||||| ||||| ||||| ||||| |
Sbjct 124106 AACGAGAAGGTCTACAAGGCTAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTTGGT 124165
Query 65479 GGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||||||||| |||||||| |||| |||||
Sbjct 124166 GGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 124203
>seq1070
Length=1195525
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917
|||||| || |||||||| || ||||| || || | ||| ||||||||||| ||
Sbjct 734362 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 734303
Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977
|| ||||| || | ||| ||||| | ||| || |||| ||| || ||||| || ||
Sbjct 734302 ATGGTTGAAAAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 734243
Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030
| ||| |||||| |||||| |||||||| || |||| || ||||
Sbjct 734242 TGTGTCAATGAAATGCTTGGAAGCGAGGCCGGATCGAGGGGCAATGCGTCCAT 734190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596557437437280
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