Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq822 224 1e-53 seq1030 152 6e-32 seq1070 82.4 9e-11 >seq822 Length=1165972 Score = 224 bits (248), Expect = 1e-53 Identities = 1146/1787 (64%), Gaps = 65/1787 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| ||||||| || | | || ||| || || || || || ||| Sbjct 796523 CCTCAGCATATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGACGATATCGAGCGAGTC 796582 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||||| || ||||||| ||| | | | || || || | || || |||| Sbjct 796583 TTGGAGACATACAACCTGATGTCCAGCAAATTCTTTACA--CATGCCTCTCCCACACTCT 796640 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || || || |||| ||||||| | ||| | ||||| | Sbjct 796641 TCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGATATGAAGGACG 796700 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | || ||||| | ||||| | | ||||| ||||| ||| ||||| Sbjct 796701 ACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTG 796760 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 75507 | |||||||| || || | || | | | || | | ||| || ||| || || Sbjct 796761 GAGGTATTGGTCTGAACGTGCACCGTATTCGTGCTACTGG--CTCCTACATCGCCGGTAC 796818 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || ||| ||| | || || |||| |||||||| || || ||| ||| || ||||| Sbjct 796819 CAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTA 796878 Query 75568 TGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGGC 75623 ||| |||| | | ||| | || | ||| | | || ||||| | || || |||| Sbjct 796879 TGTCGATCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 796937 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | | ||| || | || |||||||| | ||| ||||| ||| | || |||| || || Sbjct 796938 ACTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGG-TCCGT 796996 Query 75684 GTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | || || || |||| ||||| || || ||||| |||||||| ||||| || Sbjct 796997 GCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAG 797056 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 ||| | ||| | || | || || || || || || ||| ||||| ||| Sbjct 797057 AACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGT 797116 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGACT 75859 |||||||| || || || ||| ||| || || ||||||| | | ||| |||| Sbjct 797117 GAGGAGTTCGAGGCTCTTTACGAAAAATACGAGAAGGAGGGCAAGGGTCGCAA---GACT 797173 Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 | | || | | || | ||||| | || ||||| | | ||||| |||||||||| || Sbjct 797174 AT-CAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACCC 797232 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 | ||||| ||||||||||| |||||| ||||| ||||||||||| | || || || Sbjct 797233 TTTCATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGCACCAT 797292 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 | || || || || ||||| |||||| | ||||| | || ||| ||||| Sbjct 797293 CCGAAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCCTGACGAGGTCGCTGT 797352 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTTT 76095 ||||| | || || | || || || | ||| | || ||| | || | Sbjct 797353 CTGCAACCTTGCCTCTCTAGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGC---TA 797409 Query 76096 TGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 || | | || || || || || ||| || |||||| || || ||| ||| Sbjct 797410 CGACT-TCAAGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCA 797468 Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 | ||| || || || || ||| || ||| | || || ||||| ||| ||| Sbjct 797469 TCGACGTGAACCACTACCCTGTCCCGGAGGCT-CGCAACAG--CAACATGCGCCACCGAC 797525 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270 | |||||| | |||||||| || || || |||| || || | || ||| | || Sbjct 797526 CCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 797584 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || ||| || || ||| | || | ||||| || ||||| || ||||| || Sbjct 797585 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCC 797644 Query 76331 CTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 || || ||| | |||| | | | ||| |||| || || |||| || Sbjct 797645 CTCACTGC-CTCCGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 797703 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAAC 76447 |||||| || | || | || ||||| || |||| |||| || || || || | | Sbjct 797704 TCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCTC 797761 Query 76448 TACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | |||||||| | ||| ||||| ||||| | ||| | ||||||||||| Sbjct 797762 TGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGTATCCGTAACAGTCTG 797818 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 797819 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTC 797878 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | |||||||||| | || | |||||| |||||||| ||||| Sbjct 797879 GAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTC 797938 Query 76625 AACAAGCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680 || | ||| | |||| ||||| | || ||||| |||||| | | |||||| Sbjct 797939 AA----CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAA 797994 Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740 | | | ||| | | | |||||||||||| || || | | ||||| | |||| | Sbjct 797995 GAACCGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCTGATGT 798054 Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGC 76800 |||| ||| || || || ||||| || | | ||| || | |||||||| Sbjct 798055 CAAGGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGC 798114 Query 76801 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCA 76858 || || ||| ||||||||| | |||| ||| |||| | |||| | || Sbjct 798115 TGACCGAGGTGCCTTCATTGACC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCT 798172 Query 76859 ACGATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGG 76917 |||||| |||| || | |||||| | || | || ||||||| || ||||| ||||| Sbjct 798173 ACGATGGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAACTTGGTCTCAAGACCGG 798231 Query 76918 AATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 |||||||| || || || |||| || || |||||||||| Sbjct 798232 CATGTACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCA 798278 >seq1030 Length=250146 Score = 152 bits (168), Expect = 6e-32 Identities = 533/818 (65%), Gaps = 27/818 (3%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGAC---CCTGAAT 64770 |||||||| || || ||||| | ||||| ||||| |||||||||| | ||||| | Sbjct 123398 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAATCGCCTGACT 123457 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 | |||| || ||| | ||||||| || ||||| |||| || ||||| ||| Sbjct 123458 GCCGATGAGCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATT 123517 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || ||||| || | | | ||| | || || || ||||| ||| || || | Sbjct 123518 GTCAACGAGAACCTCGTTGAGCGATTCAGTGGC-GAGGTCCAGATCCCCGAGGCTCGTTG 123576 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | || | ||| ||| | | | ||| ||| || || || | | Sbjct 123577 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCCCTTCTCA 123635 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGC-AGTTATTTGAAGCCATCCAAACT 65007 |||||| ||||| ||||| | | ||| | | | || | ||||| | || Sbjct 123636 TTGACACCTACATCAAGGAGCCCGCCCAGC-GAACCTACCTCTTCAACGCCATTGAGACC 123694 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 | || || || |||||||| | ||||| || |||| | | | || | ||| Sbjct 123695 ATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTC- 123753 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 |||||| ||| |||| || |||| || || ||| ||||||||||||||| ||| | Sbjct 123754 CTCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 123813 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 || | |||| | ||| | |||||||| ||||||||||| ||||| |||||| || Sbjct 123814 CTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAA 123873 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGAC 65246 || || || || || ||||||||||||||| || |||||| || ||| || | | Sbjct 123874 CGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCC-TG--CCTCCTCCACTC 123930 Query 65247 TTTGCGTAA---TAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGA 65303 | | ||| | | ||| | | | ||||| | |||| | | || || || Sbjct 123931 TCACCTTAAGGGTCGTGCCAGCAAGCAGATGATCCAGGACATCATCACTGATGCCGTCAC 123990 Query 65304 GATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGA 65363 |||||| | | |||| || || || ||||| ||| || |||| ||||| ||||| Sbjct 123991 CATTGAGCAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAATTCTGA 124050 Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCC 65423 ||| |||| ||||||| || | |||||||||||| |||| | Sbjct 124051 CCTCATGAAGCAGTATATTGAGTTCGTCGCCGATCGTCTCCTCGTCGCTCTTGG-----C 124105 Query 65424 ACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGAT 65478 | | | | | || || | || || |||||||| ||||| ||||| ||||| | Sbjct 124106 AACGAGAAGGTCTACAAGGCTAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTTGGT 124165 Query 65479 GGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||||||||| |||||||| |||| ||||| Sbjct 124166 GGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 124203 >seq1070 Length=1195525 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 734362 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 734303 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || ||||| || | ||| ||||| | ||| || |||| ||| || ||||| || || Sbjct 734302 ATGGTTGAAAAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 734243 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| |||||| |||||||| || |||| || |||| Sbjct 734242 TGTGTCAATGAAATGCTTGGAAGCGAGGCCGGATCGAGGGGCAATGCGTCCAT 734190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596557437437280