Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq486 91.5 3e-13 >seq486 Length=637844 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || || ||||| | |||| || || ||| || Sbjct 83022 ATTTGCATACCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTG 83081 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||||| | |||| || || | ||| || || ||||| || | | ||| ||| Sbjct 83082 TAGTCGGCGAGGGTTCGGCCGTCCTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGA 83141 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || || || || || || || || | || | ||| || |||||||| Sbjct 83142 TCAGGAGGGATACCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGGAT 83201 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATAT 193354 |||||||| || ||||| |||||||| || || || || || || | ||| Sbjct 83202 GACTCAACCTCGAGAGTGATAGTTTTGCCAGTGAGTGTCTTGACGACTAT 83251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899636058295920