Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq486 111 1e-19 >seq486 Length=637844 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || || || ||||| || || | || Sbjct 83539 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTTGAGTCTTCC 83480 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || |||||||| Sbjct 83479 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGATCAG 83420 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| || ||||| |||||||| ||||| | | | | || ||||| ||| Sbjct 83419 CAACGTTTGATTTTCGCCGGCAAACAGCTTGAGGACGGCCGCACCCTCTCTGATTACAAC 83360 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 83359 ATTCAGAAGGAGTCTACTCTTCAC 83336 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || ||||| || ||||| || | || Sbjct 83029 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 82970 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| |||||||| || || || |||||||||||| Sbjct 82969 GATACCATTGATAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCCGATCAA 82910 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || || || ||||| ||| | || || || ||| Sbjct 82909 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACAAC 82850 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 82849 ATCCAGAAGGAATCTACCCTCCACTTGGT 82821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888427712680