Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq486 93.3 4e-14
>seq486
Length=637844
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241
||||| || || | || | ||| | || | || || || || || |||||||| |||
Sbjct 82572 TGGCCGCCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 82631
Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301
|||| |||| ||||| || || |||||||| |||| |||||||||||||| ||
Sbjct 82632 CTCAGGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGG 82691
Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361
|| || || || ||||| ||| || || | | || | ||||| ||| ||
Sbjct 82692 GGGATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGACTCG 82751
Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| |||| || | |||||| ||||| | || || ||||| || ||||||
Sbjct 82752 ACCTCAAGGGTGATCGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCATA 82802
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268
|||| ||||| || || || ||||||||||| | |||| ||| || || |||
Sbjct 83337 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCAAGCTGT 83396
Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328
|| || || | |||| ||||||||||||||| || ||||| || ||||| ||| ||
Sbjct 83397 TTGCCGGCGAAAATCAAACGTTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGAATCTTG 83456
Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388
|| | | || | ||||| | | || || || | ||| | ||||||||||||
Sbjct 83457 GACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTGCCGGTC 83516
Query 137389 AATGTTTTTACGAATATTTGCAT 137411
|| || || ||||| || |||||
Sbjct 83517 AAGGTCTTGACGAAGATCTGCAT 83539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488534039809200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |