Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq822 260 1e-64
seq1496 140 3e-28
seq486 107 2e-18
seq1030 102 8e-17
seq1259 98.7 1e-15
>seq822
Length=1165972
Score = 260 bits (288), Expect = 1e-64
Identities = 1122/1751 (64%), Gaps = 51/1751 (3%)
Strand=Plus/Minus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109
|||||| |||||||||||| || || |||||||||||||| | || || | ||||
Sbjct 798147 GACTGGGACTGGTCAATGAAGGCACCTCGGTCAGCGGCCATCTGAACGACCTGGCGCTGA 798088
Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169
|||||||| | ||||| ||||| ||||| || | | || ||| | |||
Sbjct 798087 GAA---ATCTCCCAAACAGTCTTATACAGAGCCTTGACATCAGCAGGGATGTTGGGAATG 798031
Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229
||| | || || | |||| || | || ||| | || | | ||
Sbjct 798030 TTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCC 797971
Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
| |||| ||||| | || || | | || || ||||| ||||| || ||||| ||
Sbjct 797970 ATGTCGACAAGGTCCTTGAGCAACCAGGGGTTGACAACCTGGAACTCACCAGCGAGGACA 797911
Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
|| ||| | || | |||| || | || || || ||||||||||||||| ||||||
Sbjct 797910 CGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGA 797851
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| ||| | || || ||||| || | ||||| ||| || | |||| | | | ||
Sbjct 797850 GAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATACCGTG-TGTCTT 797792
Query 148410 ATTTTGCGCT-TCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTC 148468
|| | || |||| | ||||||||||||| || || | ||||||||||||||
Sbjct 797791 GACTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGTTCCACATGTC 797732
Query 148469 GTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528
| |||| || || || ||||| ||||| | | | | ||| || || | | |
Sbjct 797731 GAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTC 797672
Query 148529 CGCCGCCAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587
| ||||| | ||| | || ||| || ||| ||| || |||||| || |||
Sbjct 797671 CTTGGCCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCT 797613
Query 148588 TGTTGAGC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644
|||||||| | ||| || | | ||| | ||||| ||||| | || || |
Sbjct 797612 TGTTGAGCTCACGAGCC-TCGGGTGAC--TCGAAGGGCATGCGCAGAGCAAGGAAAGCAT 797556
Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704
| ||||||||||| || || | |||||||| ||||| |||||| | ||| ||
Sbjct 797555 CAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTGGCGCATGTTGCTGTTGCGAGCCT 797496
Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764
| || || |||||||| |||||||||||||| || ||||| | || ||||
Sbjct 797495 CCGGGACAGGGTAGTGGTTCACGTCGATGATCTTGTTCAGGTTGCGAATAACAACCTGAC 797436
Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTG---TCATC-TA--CGATGCATCGGTTCA 148818
| | | ||| | | || ||||| | ||||| || |||| | ||
Sbjct 797435 TGACCTCGTGCAACTTCTTGAAGTCGTAGCAGGCCTCATCGTAGTTGATGAAGGAAGGCA 797376
Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878
|| | |||||| || ||||| || || ||| || ||||| | ||||| | || |
Sbjct 797375 GAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCAATAATTT 797316
Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938
| | |||||| || | | ||| ||| | ||||||||| |||||||||| ||| |
Sbjct 797315 CAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTAC 797256
Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG---A 148995
| || |||||||| |||||| | || ||||| || ||| | || | |||
Sbjct 797255 AGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCAT 797196
Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGA------CCCTCCTGCTCGT 149049
||| | || | ||| || |||| | || | |||| ||||||| |||||
Sbjct 797195 ACCAA---AGCTTCTGAGC-----CTTGATAGTC-TTGCGACCCTTGCCCTCCTTCTCGT 797145
Query 149050 A--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107
| | ||| | ||| ||||||| |||| |||||||| ||| |||| || |||||||
Sbjct 797144 ATTTTTCGTAAAGAGC--CTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTC 797087
Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167
|| |||||||| || | ||| | |||| | | || ||||||||||| ||||| ||
Sbjct 797086 GTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGG 797027
Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227
| ||| || ||| | ||||| || || | || || || ||| ||
Sbjct 797026 GATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCG 796967
Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287
|| | || | ||| | || | |||||| ||||| | ||| | || | || ||
Sbjct 796966 GAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACC 796907
Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344
||| ||||| ||||| ||||| | ||| | ||||||| || || |||| |||
Sbjct 796906 GGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCAT 796847
Query 149345 AGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCAC 149404
||| ||| ||| ||| || ||||| ||| | ||| ||| || || |
Sbjct 796846 AGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAAT 796787
Query 149405 TTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGA 149463
||||||||| | || || || || ||| | ||| ||||| || ||| ||
Sbjct 796786 ACGGTGCACGTTCAGACCAATACCTCCAGCCAT-CTTGGAGATCATGGCACAGGTCTTGA 796728
Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523
| || |||||||||||| || |||||| |||||| | || ||||| || |||
Sbjct 796727 GAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGATGACA 796668
Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT-C 149582
||| || | | || || || ||| | ||||| ||| |||||||| |||| |
Sbjct 796667 ATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGC 796608
Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642
||| ||||| | ||| | ||| | || || || || || || || ||| || |
Sbjct 796607 TGG-ACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAGATACCAACA 796549
Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702
| || ||||| | ||||||||| || ||||| | | || |||| ||||| | |
Sbjct 796548 GACACACGCATGATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCTTGAGGAGG 796489
Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCA 149762
||| || | |||||| |||||||||| | ||| | || |||||| | | | ||
Sbjct 796488 TAGGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACA 796429
Query 149763 ATGGCGGCGTC 149773
||||||| |||
Sbjct 796428 ATGGCGGAGTC 796418
>seq1496
Length=1355525
Score = 140 bits (154), Expect = 3e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| |||| || ||| | | | ||||||||||||||||
Sbjct 510705 GGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCA-TCCTCGAGCTGCTTGC 510647
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| ||||||||||| || |||||||| |||||||| |||||| ||
Sbjct 510646 CAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 510587
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| || | ||||| || || || || || |
Sbjct 510586 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGG 510527
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 510526 TCTTGACGAAAATCTGCAT 510508
>seq486
Length=637844
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| |||| || ||| ||| | || || |||||||| ||
Sbjct 82605 GTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA-TCTTCCAGCTGCTTACC 82663
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || ||||| || || ||||| || |||||||| ||||| |||
Sbjct 82664 AGCGAAGATAAGACGTTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTT 82723
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| ||| ||| || || | ||||| || || ||||| |||||
Sbjct 82724 CACGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATCGTCTTTCCGGTGAGAGT 82783
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 82784 CTTGACGAAAATCTGCAT 82801
>seq1030
Length=250146
Score = 102 bits (112), Expect = 8e-17
Identities = 337/519 (65%), Gaps = 9/519 (2%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||| | || || ||||| || ||||| || ||||| | | || ||||| |
Sbjct 124207 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 124148
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || || || |||||||| || || || ||| | ||| | ||||| ||
Sbjct 124147 CATGAAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTGCCAAGAGCGACGAGGAG 124088
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
|| || || || |||||||| |||| |||| | | |||||||| || || |
Sbjct 124087 ACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAG-AAGGG 124029
Query 120531 CACCGGCAAC-GCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
||| || | ||| |||| ||||||| ||||||| || || || ||| |||
Sbjct 124028 CACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 123969
Query 120590 CGAGCATAGTGTGGCCG--GGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647
| | || | || | |||| | | || | || | || | |||| ||
Sbjct 123968 CCTGGATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGT---GGAGGA--GGCAGGC 123914
Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707
|||||| ||||| || ||||| || || || || ||||||||| || |||||||||||
Sbjct 123913 AAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGG 123854
Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767
||||| || | |||||| |||| || | ||||||| || ||||| | ||
Sbjct 123853 CATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACC 123794
Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827
||| || || ||||| || | |||| ||| || | | ||| | ||||||
Sbjct 123793 CTCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCA 123734
Query 120828 CTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
|||||||| |||||||| || || | ||| || ||
Sbjct 123733 TCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAAT 123695
>seq1259
Length=620669
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| ||||||||||| || ||| | || || ||||| ||||| || || ||||| ||||||
Sbjct 152397 TCTTCGAGCTGCTTACCAGCGAAGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 152456
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || ||| || |||| ||||| |
Sbjct 152457 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 152516
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652
|| ||||| ||||| || || ||||||
Sbjct 152517 GTCTTGCCCGTCAGGGTCTTCACGAAA 152543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483410944258440
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