Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq822 262 5e-65
seq1030 147 3e-30
seq1070 82.4 1e-10
>seq822
Length=1165972
Score = 262 bits (290), Expect = 5e-65
Identities = 1155/1792 (64%), Gaps = 61/1792 (3%)
Strand=Plus/Minus
Query 110324 TCAAGACTGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTC 110383
|||| | |||||||||| || || |||| || || || |||||||| ||||||
Sbjct 798285 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTC 798226
Query 110384 TTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 110442
||||| || ||||||| || | || | |||||| | || |||| |||||| ||
Sbjct 798225 TTGAGACCAAGTTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTC 798167
Query 110443 TTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCC 110500
| |||| || ||||| ||| |||| ||||||||||| || || | || |||
Sbjct 798166 CTTCATGTGGATGTTCAGTGACTGGGACT--GGTCAATGAAGGCACCTCGGTCAGCGGCC 798109
Query 110501 ATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCA 110560
|| | || ||| | | ||| |||||||| || ||| ||| ||||| ||||
Sbjct 798108 ATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCA 798049
Query 110561 TCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATA 110620
| ||||| | | || ||||| |||||||| | | | ||| | | |||||||
Sbjct 798048 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATA 797989
Query 110621 TCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA----CGAGGTGCTTGTTGACAAT 110676
| | |||||| ||||| || | ||||| |||| | ||| | |||||||
Sbjct 797988 GCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGG----TTGACAAC 797933
Query 110677 GACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCA 110736
|||||||| |||||| | || | |||||||||| | ||||| || || |||||
Sbjct 797932 CTGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCA 797873
Query 110737 TTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACT 110796
|| || || |||| || || | ||| ||| || ||||| || || | | |||||
Sbjct 797872 CTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACT 797813
Query 110797 GTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG-- 110851
|||||| | ||| | ||||| ||||| ||| | |||||||| || |
Sbjct 797812 GTTACGGATACCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTC 797756
Query 110852 AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCC 110911
|| || || || |||| ||||||| ||||| || | || | || |||||||| |||
Sbjct 797755 AGAG-GGCTTGACGTTCC-ACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCC 797698
Query 110912 TCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGC 110970
| ||||| |||| ||| | | | |||| | ||| | || |||| ||
Sbjct 797697 TTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG-GCAGTGAGGGCAGC 797639
Query 110971 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 111030
||| || ||||| || ||||| | || | ||| || || ||| || || |
Sbjct 797638 GTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 797579
Query 111031 GTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGT 111089
||| || | || || |||| || || || |||||||| | |||||| |||| ||
Sbjct 797578 CATGCG-CAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGT 797520
Query 111090 GTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTC 111146
| ||||| || || | ||| || ||| || || || || ||| ||||
Sbjct 797519 GGCGCATGTTG--CTGTTGCG-AGCCTCCGGGACAGGGTAGTGGTTCACGTCGATGATCT 797463
Query 111147 GGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTG 111205
||| || || |||||| || ||| || || || || || | | || | |
Sbjct 797462 TGTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGA-AGTCGTA---G 797407
Query 111206 CGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCC 111262
| | ||| || | ||| | || || || | || || | ||||| |||||
Sbjct 797406 CAGGCCTCATCGTAGTTGATGAAGGAAGGCAGAGCTAGAGAGGCAAGGTTGCAGACAGCG 797347
Query 111263 GTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTC 111322
||| || | ||||| | |||||| || || | ||| ||||| || ||
Sbjct 797346 ACCTCGTCAGGGGCACAATACTCAATAATTTCAGTGCACAGGTTAGAACTTCGGATGGTG 797287
Query 111323 CCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTC 111382
|| | ||||||||||| ||||| ||| || |||||||||||||||||| | || |
Sbjct 797286 CCGAGGTTCTTTTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAAAGGGTTT 797227
Query 111383 CCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC-TGGTACAATGG 111440
|| ||||| ||||| | | ||||| || | ||||| | || | | | || || | |
Sbjct 797226 CCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTGATAGTCTTG 797167
Query 111441 CGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 111499
| | ||| | |||||| |||||| ||| ||| || || || |||||||||||
Sbjct 797166 C---GACCCTTGCCCTCCTTCTCGTATTTTTCGTAAAGAGCCTCGAACTCCTCACCGTAG 797110
Query 111500 GCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCA 111559
||||| ||| || || || || || || | || | ||| | ||| | |||
Sbjct 797109 CAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCA 797050
Query 111560 ACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGC 111618
|| |||||||| ||||| || || ||||| |||| || || || | ||| || |
Sbjct 797049 ACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGA-C 796991
Query 111619 CTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGG 111678
||| || | ||| ||||| ||| | |||||||| || | || ||| | |||||| ||
Sbjct 796990 CTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGG 796931
Query 111679 CTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGC 111735
||| || |||| || | || || ||| ||| | |||| |||||||| ||
Sbjct 796930 CTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGC 796871
Query 111736 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCC 111794
||| ||| || || |||||||| |||| || || | ||| ||| || || || |
Sbjct 796870 AGTGTTGTTGAAGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGC 796811
Query 111795 GA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 111853
|| || ||| | | || | | | || | || || |||||||| |||||| |
Sbjct 796810 GATGTAGGAG--CCAGTAGCACGAATACGGTGCACGTTCAGACCAATACCTCCAGCCATC 796753
Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913
|| ||||| ||||| | | ||||| | ||||| || | || ||| |||||
Sbjct 796752 TTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTC 796693
Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973
| ||| | ||||||| |||| || || || |||||||| |||||||| ||
Sbjct 796692 ATATCGACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTG 796633
Query 111974 GGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031
|| | || || || | | | ||| ||||||| || ||||||||||||||| |
Sbjct 796632 GGAGAGGCATG--TGTAAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGACTCGCT 796575
Query 112032 CAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
| || || || || ||| || | | || ||||||| ||| | ||| ||
Sbjct 796574 CGATATCGTCACCCCAGATACCAACAGACACACGCATGATCATATGCTGAGG 796523
>seq1030
Length=250146
Score = 147 bits (162), Expect = 3e-30
Identities = 532/818 (65%), Gaps = 27/818 (3%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || |||||||| |||||||||||||| ||| ||||| ||||| |||||
Sbjct 124203 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 124144
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485
|||||||| || || | || || | | | | || |||| |||||
Sbjct 124143 AAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACGAGGA 124089
Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545
||||||| | || ||||||| |||| ||| ||||| ||||| |||| |||
Sbjct 124088 GACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGGG 124029
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
||| ||||| || || || |||| | | |||||| || || || | | ||||
Sbjct 124028 CACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 123969
Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 122662
| ||||| | | | ||| | | ||| | || | || ||| || |||||
Sbjct 123968 CCTGGATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCAA 123912
Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722
| || ||||||||||||||| || || || || || || |||||| || || ||||
Sbjct 123911 AGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCA 123852
Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 122782
||||||| |||||||| | ||| | |||| | || | ||| ||||||||||||||
Sbjct 123851 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCT 123792
Query 122783 CCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCAT 122841
| ||| || || |||| || || | ||| |||||| ||| ||| | | | ||||
Sbjct 123791 CAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 123733
Query 122842 TTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAAC 122901
|| ||||| | |||||||| || || || | || | ||||| | || |
Sbjct 123732 CGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAGG 123673
Query 122902 T-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCC 122960
| | ||| | | ||||| ||||| ||||||| | || || || |||
Sbjct 123672 TAGGTTC-GCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGGTCTCGGA 123614
Query 122961 ATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAA 123019
||| | | | ||| ||| | || | ||||||| | || || ||| ||||| |
Sbjct 123613 ATGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCAACGAGCCTCGGGGATCTGGA 123555
Query 123020 CCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAG 123078
|||| || | ||| | | | || ||||| ||||| ||||| || |||| |||
Sbjct 123554 CCTC-GCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAG 123496
Query 123079 AATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCG 123135
|| || ||||||| | ||| || |||| || ||||| | |||||||||
Sbjct 123495 AAGGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGATTGTTCCAGTCG 123436
Query 123136 TCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
| ||||| ||||| | ||||| || || ||||||||
Sbjct 123435 TGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 123398
>seq1070
Length=1195525
Score = 82.4 bits (90), Expect = 1e-10
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 164605 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 164664
|||| || |||| || |||||||| |||||| |||||| ||| | || || |
Sbjct 734190 ATGGACGCATTGCCCCTCGATCCGGCCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 734249
Query 164665 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 164724
|||| || ||| |||| || ||| | ||||| ||| | || ||||| || ||
Sbjct 734250 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTTTTCAACCATAACGAAT 734309
Query 164725 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 164777
||||||||||| ||| | || || ||||| || |||||||| || ||||||
Sbjct 734310 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 734362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628019195997600
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