Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq822 199 5e-46
seq1030 197 2e-45
>seq822
Length=1165972
Score = 199 bits (220), Expect = 5e-46
Identities = 1097/1724 (64%), Gaps = 53/1724 (3%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
|||||||||| || || |||| || || ||||||||||| || |||||||| |
Sbjct 798278 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTCTTGAGAC 798219
Query 117865 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATG 117923
| | |||||| | | || | ||||| || | |||| | || || | ||||
Sbjct 798218 CAAGTTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTAGGGTCCTTCATG 798160
Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983
|| ||||| ||||| || || |||||| || || || || ||||| | ||
Sbjct 798159 TGGATGTTCAGTGACTGGGACTGGTCAATGAAGGCACCTCGGTCAGCGGCCATCTGAACG 798100
Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043
|| | | || ||||| |||||| | || || ||| | |||| | |||||
Sbjct 798099 ACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCAGCAGGGATG 798040
Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103
| || || || ||||| ||| | | | ||| | | ||||||| | | |||
Sbjct 798039 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 797980
Query 118104 CAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTC 118159
|| ||||| || | || |||| | || || | |||||||| |||||
Sbjct 797979 CACAGACCCATGTCGACAAGGTCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTC 797924
Query 118160 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219
||| |||||| |||| | | ||||| |||| ||||| ||||| |||||||| |||||
Sbjct 797923 ACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTT 797864
Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279
|||| || || | || ||| || ||||| || || | ||| || ||||||||||
Sbjct 797863 GCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGAT 797804
Query 118280 ACCCTTTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 118337
||| | | | | | | | | || || ||| |||||||| || | | ||
Sbjct 797803 ACCGTGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTG 797746
Query 118338 CCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCA 118397
| | |||||| || |||||||||||||| | || || || || |||| || ||
Sbjct 797745 ACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAG 797686
Query 118398 TATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATT 118454
|| || ||||| ||| |||| | ||||| || |||||| ||||| || ||
Sbjct 797685 TAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGGTAGATG 797629
Query 118455 GTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 118514
|| || || || | || | | |||||| || || || | | || ||
Sbjct 797628 GTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAG 797570
Query 118515 AA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573
| || || |||| || || || || |||||||| ||||| || || || | ||| ||
Sbjct 797569 AGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTGGCGCATGTT 797510
Query 118574 AGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630
|| ||||| |||| || || || ||| ||||| | | | || || ||
Sbjct 797509 GCTGTTGCGAGC---CTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTTGTTCAGGTT 797453
Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCTT 118689
| ||||||| ||| || || | ||| | | | || | | | | || || |
Sbjct 797452 GCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGAAGTCGTAGCAG-GCCTCATCGT 797394
Query 118690 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 118749
|||| | ||| || || | || || || || || |||| | ||| ||
Sbjct 797393 AGTTGATGAAGGAAGGCAGAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGG 797334
Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809
|| ||||| |||||||| ||||||| ||| ||||| |||||||| | ||||||||
Sbjct 797333 CACAATACTCAATAATTTCAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTT 797274
Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869
| || ||| |||||| ||||||||||| |||||| | || | || ||||| || |
Sbjct 797273 GGTTGCTCTTGCGGTTACAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCT 797214
Query 118870 GGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCC 118926
| | || ||||| || | ||| | | || | ||| || | | ||| || | |
Sbjct 797213 GAGCCTCAAGAATGGCATACCAAAGCTTCTG-AGCCTTGATAGTCTTGCG-ACCCTTG-C 797157
Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986
|||| | |||||| ||| ||| || || || ||||| ||||| | || | ||| |
Sbjct 797156 CCTCCTTCTCGTATTTTTCGTAAAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGC 797097
Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046
| || || | ||||| | || | ||| | ||| || ||||| |||||||| |
Sbjct 797096 CAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAA 797037
Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106
| || || |||||||| || || ||| || || || || | || || | || |
Sbjct 797036 AAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGT 796977
Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 119166
| || || | || | || || | || ||| | |||||| || || ||||| | |
Sbjct 796976 GGTTCTTTCGGAGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGG 796917
Query 119167 CGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220
| | | || | ||| | | ||| |||| | ||||| | |||||| ||| |
Sbjct 796916 CAAAAGCACCGGGTCGCTT--GTTG-CCACCCTGATCGACATAGCGAGCAGTGTTGTTGA 796860
Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGA 119278
| ||||||||||| |||| | || | |||| || || || || ||| || |||
Sbjct 796859 AGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGC 796800
Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338
| | | || | | | ||| | || || ||||||||| || ||| ||| |||||
Sbjct 796799 C--AGTAGCACGAATACGGTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCAT 796742
Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398
|| || | ||||| | ||||||| || || || ||| |||| | ||| |
Sbjct 796741 GGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAA 796682
Query 119399 GAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458
|||||| |||| ||| ||| || ||||||||||||||||| || || | || ||
Sbjct 796681 GAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATG 796622
Query 119459 GATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500
|| | | | ||| ||||||| || ||| |||||||||||
Sbjct 796621 --TGTAAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGAC 796580
>seq1030
Length=250146
Score = 197 bits (218), Expect = 2e-45
Identities = 538/812 (66%), Gaps = 15/812 (2%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 124203 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 124144
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| ||||| ||||| | | || | | | || | |||| |||||||||
Sbjct 124143 AAGTCAAAGGGGTTGCTAGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACGAGGAGACG 124085
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| ||||||| |||| ||| || || ||||| |||| ||| |||
Sbjct 124084 ATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAATTCATGCCGAGAAGGGCACA 124025
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
||||| || || || |||| ||| ||||||| || || || | |||| | ||
Sbjct 124024 GGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTG 123965
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
|| ||| | ||| || | | || | || | || ||| || |||||| ||
Sbjct 123964 GATCATCTGCTTGCTGGCACGACCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 123908
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
|||||||||||| ||||| |||||||| || || |||||| ||| || ||||||||
Sbjct 123907 AGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAG 123848
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | |||||| || | ||| | || ||||||||| ||||| ||
Sbjct 123847 ACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAAC 123788
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203
| ||||| |||| |||||||| ||||||||| | ||| | | ||| ||
Sbjct 123787 AGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGAT 123728
Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263
||||| | ||||| || ||| || || | ||||| || || | ||||| | |
Sbjct 123727 GGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGGT 123668
Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323
| | || || |||||||| | || ||||| || || || ||| |||||
Sbjct 123667 TCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGGTCTCGGAATGGAT 123608
Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382
| | ||| || | ||| | ||||||| | || || ||| ||||| |||||
Sbjct 123607 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTC-G 123550
Query 130383 CTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 130441
| | ||| | | | || ||||| ||||| ||||| || |||| || || ||
Sbjct 123549 CCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAGGCA 123490
Query 130442 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCGTCAAGA 130498
||||| | | ||| ||| |||| | ||||| | |||||||||| |||
Sbjct 123489 AGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGATTGTTCCAGTCGTGGAGA 123430
Query 130499 TCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
||||| |||||||| | |||||| ||||||||
Sbjct 123429 TCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 123398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618422591652360
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