Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq822 257 2e-63
seq1030 149 7e-31
>seq822
Length=1165972
Score = 257 bits (284), Expect = 2e-63
Identities = 1149/1792 (64%), Gaps = 61/1792 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||| ||||||| ||| | | ||||| || || || || || |||
Sbjct 796523 CCTCAGCATATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGACGATATCGAGCGAGTC 796582
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
|||||||||||| || ||||||| ||| | | | || || || | || || ||||
Sbjct 796583 TTGGAGACATACAACCTGATGTCCAGCAAATTCTTTACA--CATGCCTCTCCCACACTCT 796640
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| |||||||| || |||||| |||| ||||||| | ||| | ||||| |
Sbjct 796641 TCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGATATGAAGGACG 796700
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | || ||||| | ||||| | | ||||| ||||| ||| |||||
Sbjct 796701 ACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTG 796760
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517
| |||||||| || || | || | | | || | | ||| || ||| || ||
Sbjct 796761 GAGGTATTGGTCTGAACGTGCACCGTATTCGTGCTACTGG--CTCCTACATCGCCGGTAC 796818
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
|| ||| ||| | || || |||| |||||||| || || ||| ||| || |||||
Sbjct 796819 CAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTA 796878
Query 104578 TGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
||| |||| | ||| ||| || || | || |||| || ||||| |||||
Sbjct 796879 TGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCA 796938
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
| | ||| || | || |||||||| | || ||||| ||| | ||||||| ||
Sbjct 796939 CTCTGATGTCTTCGAATTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGTGC 796998
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
||| || || ||| ||| || ||||| || ||||| || |||||| | ||||| |||
Sbjct 796999 CCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAGAA 797058
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
|| | ||| | || | || || || || ||||| ||| |||| | |||||
Sbjct 797059 CGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGTGA 797118
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTG 104872
|||||| || || |||||| ||| ||||| |||| ||| | | | | || ||| |
Sbjct 797119 GGAGTTCGAGGCTCTTTACGAAAAATACGA-GAAGGAGGGCAAGGGTC-GCAAGACTAT- 797175
Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
| || | || | | ||| | || ||||| || |||| || |||||||| | || |
Sbjct 797176 CAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACCCTTT 797235
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||||| ||||| || |||||||||| ||||| || |||||||| | || |||
Sbjct 797236 CATGCTCTACAAGGATGCCTGTAACCGCAAGAGCAACCAAAAGAACCTCGGCACCATCCG 797295
Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051
||||| || || || || ||||| | || | | | | || ||| ||||| ||
Sbjct 797296 AAGTTCTAACCTGTGCACTGAAATTATTGAGTATTGTGCCCCTGACGAGGTCGCTGTCTG 797355
Query 105052 TAACCTCGCATCAATCGCTCTCCC---------CAAGTATG-TGGATCCAGAGACAAAGA 105101
||||| || || | ||||| || ||| || | || || | | | ||
Sbjct 797356 CAACCTTGCCTCTCTAGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTG---CTACGA 797412
Query 105102 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161
| || | | || | ||||| || | | ||| | ||||| ||||
Sbjct 797413 C--TTCA-----AGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 797465
Query 105162 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221
| || || || ||||| || | ||||| || || ||| | ||||| |
Sbjct 797466 TCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGCAACATGCGCCACCGAC 797525
Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 105280
| |||||||||||||||||||| || || |||| ||| || || || ||| | ||
Sbjct 797526 CCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 797584
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| || ||| || || |||| || || || |||||||| || ||||| ||
Sbjct 797585 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCC 797644
Query 105341 CTTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398
|| || || | || |||| ||| || ||||| || ||||| |||| |
Sbjct 797645 CTCACTGCCTCCGTGC--AGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCT 797702
Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACT 105458
|||| || || | || | || || || || |||||| | | || || | ||
Sbjct 797703 CTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCT 797762
Query 105459 ACGACTGGGAAGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
|||||||| ||| || || | | | ||||| | ||| | ||||||||||| ||
Sbjct 797763 GGGACTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGTATCCGTAACAGTCTGCT 797820
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576
| | ||||| ||||| || ||| ||| | || || |||| || || || ||||| ||
Sbjct 797821 CCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCGA 797880
Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636
|||||||| | |||||||| | | || | |||||| || ||||| | |||||||
Sbjct 797881 GCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAA 797940
Query 105637 CAAGCATCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 105692
| || || | | ||||| || || ||||| |||||| | | |||||||
Sbjct 797941 ----CCCCTGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGA 797996
Query 105693 ATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTA 105752
| | ||| | | | |||||||||||| || ||| | || || ||| | |
Sbjct 797997 ACCGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCTGATGTCA 798056
Query 105753 AGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAG 105812
|| |||| || |||||||| || | | ||| || | |||||||| |
Sbjct 798057 AGGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTG 798116
Query 105813 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAAC 105870
| || ||| ||||||||| | |||| ||| |||| || |||| | || ||
Sbjct 798117 ACCGAGGTGCCTTCATTGACC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCTAC 798174
Query 105871 GATGTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGA 105929
|||| |||| || | ||||||| | | || | ||||| |||||||| || || |
Sbjct 798175 GATGGGCAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAACTTGGTCTCAAGACCGGCA 798233
Query 105930 TGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981
|||| ||||| || | |||| || || |||||||||| | ||||
Sbjct 798234 TGTACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 798285
>seq1030
Length=250146
Score = 149 bits (164), Expect = 7e-31
Identities = 353/522 (68%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
|||||||| || ||| | |||||||| |||||| | |||| ||||| | || | | |
Sbjct 123398 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAATCGCCTGACT 123457
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
| |||| || ||| | ||||||| || ||||| |||| || ||||| |||
Sbjct 123458 GCCGATGAGCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATT 123517
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| || | | || || ||||| || |||| | || || | |
Sbjct 123518 GTCAACGAGAACCTCGTTGAGCGATTCAGTGGCGAGGTCCAGATCCCC-GAGGCTCGTTG 123576
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| | | | ||| ||||| ||| ||||
Sbjct 123577 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCATTCCGAGACCTACTCCCTTCTCA 123635
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 94734
| |||| || || ||||| || || ||| | | ||||| | ||||| | ||
Sbjct 123636 TTGACACCTACATCAAGGAGCCCGCCCAGC-GAACCTACCTCTTCAACGCCATTGAGACC 123694
Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 94793
|||| || || | |||||| || || ||||| || ||| | | | || | | |
Sbjct 123695 ATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTCC 123754
Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853
| ||||||| |||| ||| | || || || ||||||||||||||||||| ||| |
Sbjct 123755 T-CCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 123813
Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913
||| | |||| | |||||||||||||| ||||||||||| || || |||||||||
Sbjct 123814 CTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAA 123873
Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||| ||||||||||| ||||| |||||| || |||||
Sbjct 123874 CGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGC 123915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583248908770440
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