Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq486 87.8 1e-12 >seq486 Length=637844 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| ||||| || ||||| || ||||| || || ||| Sbjct 82803 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 82862 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| |||||||| || || || || || | |||||||| || || || Sbjct 82863 AGAGTTCGGCCGTCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGA 82922 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | |||||||||||| ||||| Sbjct 82923 ATACCCTCCTTGTCTTGAATCTT 82945 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || ||||| |||||| |||||||| ||||| || || || || |||| ||||| ||| Sbjct 83337 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCAAGCTGT 83396 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || ||||| || || || || || | ||||||||||| ||| || Sbjct 83397 TTGCCGGCGAAAATCAAACGTTGCTGATCGGGGGGGATGCCCTCCTTGTC-CTGAATCTT 83455 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| ||| || || | || || || || ||||| Sbjct 83456 GGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 83515 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTG 34710 || || || || || ||||||||| || Sbjct 83516 CAAGGTCTTGACGAAGATCTGCATGATG 83543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723343864023