Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq822 188 1e-42
>seq822
Length=1165972
Score = 188 bits (208), Expect = 1e-42
Identities = 610/936 (65%), Gaps = 16/936 (2%)
Strand=Plus/Minus
Query 77675 CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTAT 77734
|| ||||| ||| || || || || || || ||||| | || | ||| | || ||
Sbjct 797377 CAGAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCAATAAT 797318
Query 77735 CTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATT 77794
|| || || || ||| || | ||| ||||| || || | |||||||||||| ||
Sbjct 797317 TTCAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTT 797258
Query 77795 GCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGA 77854
|| | ||||| || || || || || | || || ||| |||| | || | ||| |
Sbjct 797257 ACAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGC 797198
Query 77855 TTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCT-CTCTCTTTC----ATA 77908
| ||| | | ||| ||| || || || ||| | | | | ||| ||| ||
Sbjct 797197 ATACCAAA-GCTTCTGAGCCTTGAT---AGTCTTGCGACCCTTGCCCTCCTTCTCGTATT 797142
Query 77909 TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATT 77968
|| ||| | |||| || || || || || | || | | |||||||| || ||
Sbjct 797141 TTTCGTAAAGAGCC--TCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTT 797084
Query 77969 TGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTAT 78028
|||||||||| || ||||||||| | | | ||| || |||||||| |||||||| ||
Sbjct 797083 GGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGAT 797024
Query 78029 CCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAG 78088
||| || || | || || || |||| | || || || || |||||| ||
Sbjct 797023 CCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGGAG 796964
Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148
||| || || || | | |||||| ||||| || || || || || || | | | || ||
Sbjct 796963 ATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGG 796904
Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208
||| || || || |||||||| | ||| | || ||||| || | || | | ||| ||
Sbjct 796903 TCGCTTGTTGCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGG 796844
Query 78209 AATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATT 78268
|| || ||||| ||||| || || || || | || || ||| | || ||||||
Sbjct 796843 AACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAATACG 796784
Query 78269 ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328
| | | || || ||||| |||||||| || || | || || || | ||
Sbjct 796783 GTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGT 796724
Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGT-TAAGAAGAAAACAGCTAGACATTT 78387
||||||||| ||||| |||||||| ||| |||| | | ||||| || | |||| ||
Sbjct 796723 ATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGAT-GACAATT 796665
Query 78388 GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAG 78447
| | ||| || || || || || | ||| ||||| ||||| ||||| |||| |
Sbjct 796664 GGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGG 796605
Query 78448 AAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCT 78506
| | || |||||||| || | || || || || || | || || || |
Sbjct 796604 ACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAG-ATACCAACAGAC 796546
Query 78507 ACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTAT 78566
|||||||| | |||||||||||| | || || ||||| | || || | | |||
Sbjct 796545 ACACGCATGATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTAG 796486
Query 78567 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602
||| |||||||| || || ||||| || | ||||
Sbjct 796485 GATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 796450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694654637439840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |