Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq822 224 1e-53 >seq822 Length=1165972 Score = 224 bits (248), Expect = 1e-53 Identities = 620/938 (66%), Gaps = 22/938 (2%) Strand=Plus/Minus Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TATTGTATT 76327 ||||||| ||| || || || || || || ||||| | || |||| || | || Sbjct 797376 AGAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGG---GGCACAATACTCAATA 797320 Query 76328 ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTG 76387 || || ||||| || ||| || ||| || || || || | |||||||||||| | Sbjct 797319 ATTTCAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGG 797260 Query 76388 TTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATA 76447 ||||| | ||||| || || | || || ||||||| ||| |||| | || | ||| Sbjct 797259 TTACAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATG 797200 Query 76448 GATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCATA 76503 | | ||| | | ||| ||| || || || ||| | ||| ||| | || || Sbjct 797199 GCATACCAAA-GCTTCTGAGCCTTGAT---AGTCTTGCGACCCTTGCCCTCCTTCTCGTA 797144 Query 76504 TTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCA 76561 || | ||| | | || || || || || || | || | | ||||| || || Sbjct 797143 TTTTTCGTAAAGAGCC--TCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCG 797086 Query 76562 TTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGT 76621 || || ||||||| || ||| ||||| | | | ||| || |||||||| |||||||| Sbjct 797085 TTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGG 797026 Query 76622 ATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA 76681 ||||| || || | || || || |||| | || || || || |||||| Sbjct 797025 ATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGG 796966 Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741 ||||| ||||| || | | |||||| ||||| || || || || || || | | |||| Sbjct 796965 AGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCG 796906 Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801 ||||| || || || |||||||| | ||| | |||||||| || | || | | ||| Sbjct 796905 GGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATA 796846 Query 76802 GGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861 |||| || |||||| |||||||| || || || | || || ||| ||||||||| Sbjct 796845 GGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAATA 796786 Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAAT 76921 | || || || ||||| ||||| || ||||| | |||||| || | Sbjct 796785 CGGTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGA 796726 Query 76922 GTGTCATAGATGCCCTCTATACTATCATCCATCATGT-TAAGAAGAAAACAGCTAGACAT 76980 || || ||||||||||| ||||| || ||| |||| | | ||||| || | |||| Sbjct 796725 GTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGAT-GACAA 796667 Query 76981 TTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTC 77040 ||| | ||| || || || || || | ||| ||||| ||||| || || |||| Sbjct 796666 TTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCT 796607 Query 77041 AGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAG 77099 || | || |||||||| || | ||| || ||||| || | || || |||| Sbjct 796606 GGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAG-ATACCAACAG 796548 Query 77100 CGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGT 77159 |||||||| | |||||||||||| || || ||| ||||| | || || | | || Sbjct 796547 ACACACGCATGATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCTTGAGGAGGT 796488 Query 77160 ATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 | ||| |||||||| || || ||||| || | |||| Sbjct 796487 AGGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 796450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712919865049920