Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq822 224 1e-53
>seq822
Length=1165972
Score = 224 bits (248), Expect = 1e-53
Identities = 620/938 (66%), Gaps = 22/938 (2%)
Strand=Plus/Minus
Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TATTGTATT 76327
||||||| ||| || || || || || || ||||| | || |||| || | ||
Sbjct 797376 AGAGCTAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGG---GGCACAATACTCAATA 797320
Query 76328 ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTG 76387
|| || ||||| || ||| || ||| || || || || | |||||||||||| |
Sbjct 797319 ATTTCAGTGCACAGGTTAGAACTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGG 797260
Query 76388 TTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATA 76447
||||| | ||||| || || | || || ||||||| ||| |||| | || | |||
Sbjct 797259 TTACAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATG 797200
Query 76448 GATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCATA 76503
| | ||| | | ||| ||| || || || ||| | ||| ||| | || ||
Sbjct 797199 GCATACCAAA-GCTTCTGAGCCTTGAT---AGTCTTGCGACCCTTGCCCTCCTTCTCGTA 797144
Query 76504 TTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCA 76561
|| | ||| | | || || || || || || | || | | ||||| || ||
Sbjct 797143 TTTTTCGTAAAGAGCC--TCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCG 797086
Query 76562 TTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGT 76621
|| || ||||||| || ||| ||||| | | | ||| || |||||||| ||||||||
Sbjct 797085 TTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGG 797026
Query 76622 ATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA 76681
||||| || || | || || || |||| | || || || || ||||||
Sbjct 797025 ATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTTCGG 796966
Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741
||||| ||||| || | | |||||| ||||| || || || || || || | | ||||
Sbjct 796965 AGATCAAGGAATTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCG 796906
Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801
||||| || || || |||||||| | ||| | |||||||| || | || | | |||
Sbjct 796905 GGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATA 796846
Query 76802 GGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861
|||| || |||||| |||||||| || || || | || || ||| |||||||||
Sbjct 796845 GGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGAATA 796786
Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAAT 76921
| || || || ||||| ||||| || ||||| | |||||| || |
Sbjct 796785 CGGTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGA 796726
Query 76922 GTGTCATAGATGCCCTCTATACTATCATCCATCATGT-TAAGAAGAAAACAGCTAGACAT 76980
|| || ||||||||||| ||||| || ||| |||| | | ||||| || | ||||
Sbjct 796725 GTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCGACCAAGAAGCAAGAT-GACAA 796667
Query 76981 TTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTC 77040
||| | ||| || || || || || | ||| ||||| ||||| || || ||||
Sbjct 796666 TTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCT 796607
Query 77041 AGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAG 77099
|| | || |||||||| || | ||| || ||||| || | || || ||||
Sbjct 796606 GGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCGTCACCCCAG-ATACCAACAG 796548
Query 77100 CGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGT 77159
|||||||| | |||||||||||| || || ||| ||||| | || || | | ||
Sbjct 796547 ACACACGCATGATCATATGCTGAGGCCGCTCGACAATCTTACCGTCAATCTTGAGGAGGT 796488
Query 77160 ATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197
| ||| |||||||| || || ||||| || | ||||
Sbjct 796487 AGGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 796450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712919865049920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |