Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1496 129 4e-25
seq486 123 2e-23
seq1259 100 2e-16
>seq1496
Length=1355525
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| |||||| ||||||||||| ||| || ||| | || ||
Sbjct 510716 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCCTCG 510657
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | |||||||| || | || | || ||||| |||
Sbjct 510656 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 510597
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || |||||||| | || ||||||||
Sbjct 510596 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 510537
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||||||| ||||| || |||||
Sbjct 510536 CCCGTGAGGGTCTTGACGAAAATCTGCAT 510508
>seq486
Length=637844
Score = 123 bits (136), Expect = 2e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGT 44186
|||| ||| || || ||||| ||||||||||| |||| ||||| || |||| |
Sbjct 82821 ACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT--CGGCCGTCCT 82878
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| || || ||||| | ||||| ||||| | ||| | ||| ||||| ||
Sbjct 82879 CAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTTGTCTT 82938
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||||| | | ||||| |||| || || || |||| ||||| ||||
Sbjct 82939 GAATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCT 82998
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| ||||||||||| ||||||||||||||
Sbjct 82999 TTCCAGTGAGGGTCTTGACGAAGATTTGCAT 83029
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| || ||||||||||| | ||| ||| |||| ||
Sbjct 83331 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCA 83390
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||| || |||||||| |||||||| | || | || ||||| |||
Sbjct 83391 AGCTGTTTGCCGGCGAAAATCAAACGTTGCTGATCGGGGGGGATGCCCTCCTTGTCCTGA 83450
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||||| || || ||||| | || || |||||
Sbjct 83451 ATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTG 83510
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || | |||||| |||||||| |||||||||
Sbjct 83511 CCGGTCAAGGTCTTGACGAAGATCTGCATGATG 83543
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| ||| || ||| | || |||
Sbjct 82593 ACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCC 82652
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||| |||||||| | || | ||| ||||| |||
Sbjct 82653 AGCTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGGGGGATACCCTCCTTGTCCTGA 82712
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| ||| || ||||| | || |||||||||
Sbjct 82713 ATCTTGCTCTTCACGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATCGTCTTT 82772
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||| || |||||
Sbjct 82773 CCGGTGAGAGTCTTGACGAAAATCTGCAT 82801
Score = 105 bits (116), Expect = 5e-18
Identities = 145/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| || ||||| || |||||||| |||||||| || |||| ||
Sbjct 83049 ACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCGTCCTCA 83108
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||||| ||||||||||| | ||| | ||| ||||| |||
Sbjct 83109 AGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGG 83168
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| |||| || || ||||| | || || || |
Sbjct 83169 ATCTTTGACTTGACATTGT--CGATGGTATCGGATGACTCAACCTCGAGAGTGATAGTTT 83226
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
| || ||||| ||||| ||||
Sbjct 83227 TGCCAGTGAGTGTCTTGACGA 83247
>seq1259
Length=620669
Score = 100 bits (110), Expect = 2e-16
Identities = 133/183 (73%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| ||| || | || || |||||||| || || ||||
Sbjct 152362 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCTTCGAGCTGCTTACCAGCGAAGA 152421
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||| || || | || | || ||||| ||| ||||| ||| || |||
Sbjct 152422 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 152481
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| ||||| |||||||||||
Sbjct 152482 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 152539
Query 44326 GAA 44328
|||
Sbjct 152540 GAA 152542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359983244178327
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