Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F002234085. 1_202017-07-27] 1,726 sequences; 52,309,290 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq80 134 2e-26 >seq80 Length=2348490 Score = 134 bits (148), Expect = 2e-26 Identities = 322/482 (67%), Gaps = 9/482 (2%) Strand=Plus/Plus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || |||||||||||| ||| || || | || ||| | || |||| Sbjct 1705112 CAGCCCAACTCTGGTGCACAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 1705169 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || || | || || | || || || || Sbjct 1705170 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCGGCTCACGGT 1705228 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | | Sbjct 1705229 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 1705288 Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | ||| ||| | || ||| | ||||| || || ||| | | | ||| Sbjct 1705289 AAGACTGGTAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAG 1705348 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| |||| ||||| ||||| ||||| || || | | |||| Sbjct 1705349 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 1705408 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || | ||| | |||| || ||| |||| |||| || || | || ||||| || | Sbjct 1705409 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 1705468 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || ||| | ||||| | || ||||| |||||| ||||| || ||||| ||| Sbjct 1705469 AACGCCCAGATCGGTCTTTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTCAAC 1705528 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 | || ||||| ||||||||||| || || || || ||||| || || || ||||| | | Sbjct 1705529 CTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGTGGTCCCGGTGTTGGCCCTATCGCT 1705588 Query 159778 GT 159779 || Sbjct 1705589 GT 1705590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588038512795360